CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bra020715
(
Brassica rapa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bra020715
T199989_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra020715.1-P
GRAS
126
497
LRADLVSCAKAMSENDLMMARSMMEKLRLMVSVSGEPIERLGAYLLEGLVAQLSSSGSSIYKSLNQCPEPASTDLLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDTTSAYARGGGLNIVGNRLAKLAKQFNVPFEFNSVSVSVSEVRPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFKETMDYYDAMFESIDVTLPRNHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIRSLLRNYSDKYRLEERDGALYLGWMRRDLVASCAWK
Links
Other
GRAS
family TFs
Other
Brassica rapa
TFs
79 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMAM009961
Anopheles maculatus
AMAM009961
I
BGIBMGA010300
Bombyx mori
BGIBMGA010300
I
BXY_0883500
Bursaphelenchus xylophilus
BXY_0883500
I
Cflo_05860--XP_394134.2_APIME
Camponotus floridanus
Cflo_05860--XP_394134.2_APIME
I
Cmyd_10006628
Chelonia mydas
Cmyd_10006628
I
DAPPUDRAFT_9350
Daphnia pulex
DAPPUDRAFT_9350
I
DAPPUDRAFT_9412
Daphnia pulex
DAPPUDRAFT_9412
N
EFV49290
Trichinella spiralis
EFV49290
I
ENSCING00000013609
Ciona intestinalis
ENSCING00000013609
I
ENSCSAVG00000007148
Ciona savignyi
ENSCSAVG00000007148
I
POU2F2
Homo sapiens
ENSG00000028277
D
ENSOANG00000013329
Ornithorhynchus anatinus
ENSOANG00000013329
I
ENSSHAG00000018562
Sarcophilus harrisii
ENSSHAG00000018562
I
acj6
Drosophila melanogaster
FBgn0000028
D
GPUH_0000951201
Gongylonema pulchrum
GPUH_0000951201
I
HelroG138303
Helobdella robusta
HelroG138303
I
L596_g13343
Steinernema carpocapsae
L596_g13343
I
L798_02028
Zootermopsis nevadensis
L798_02028
I
L898_g18190
Steinernema monticolum
L898_g18190
I
MESCA009897
Megaselia scalaris
MESCA009897
I
Ogr05710
Ophisaurus gracilis
Ogr05710
I
PPAI004106
Phlebotomus papatasi
PPAI004106
I
SBAD_0000673901
Soboliphyme baturini
SBAD_0000673901
I