CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_kg.8__2739__AT5G66770.1
(
Arabidopsis lyrata
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
fgenesh2_kg.8__2739__AT5G66770.1
T200137_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.8__2739__AT5G66770.1
GRAS
211
564
LLRAIYDCARISESDPNEASKTLVQIRESVSELGDPTERVGFYFTEALSNRLSPDSPATSSSSSTEDLILSYKTLNDACPYSKFAHLTANQAILEATENSNKIHIVDFGIVQGIQWPALLQALATRSSGKPTQIRVSGIPAPSLGDSPEPSLIATGNRLRDFAKVLDLNFDFIPILTPIHLLNGSSFRVDPDEVLAVNFMLQLYKLLDETPTIVDTALRLAKSLNPRVVTLGEYEVSLNRVGFANRVKNALQFYSAVFESLEANLGRDSEERVRVERELFGRRISGLIGPEKTGIHRERMEEKEQWRVLMENAGFESVKLSNYAVSQAKILLWNYNYSNLYSFVESKPGFISLA
Links
Other
GRAS
family TFs
Other
Arabidopsis lyrata
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30136.m001048
Ricinus communis
30136.m001048
N
Aquca_022_00282
Aquilegia coerulea
Aquca_022_00282
I
Bo3g005150
Brassica oleracea
Bo3g005150
N
Bo3g101690
Brassica oleracea
Bo3g101690
I
Bostr.0568s0398
Boechera stricta
Bostr.0568s0398
I
Bra009379
Brassica rapa
Bra009379
N
Bra024263
Brassica rapa
Bra024263
I
Cagra.0248s0087
Capsella grandiflora
Cagra.0248s0087
I
Carubv10026643m.g
Capsella rubella
Carubv10026643m.g
I
cassava2513.valid.m1
Manihot esculenta
cassava2513.valid.m1
I
cassava2514.valid.m1
Manihot esculenta
cassava2514.valid.m1
I
cassava2515.valid.m1
Manihot esculenta
cassava2515.valid.m1
I
cassava43227.valid.m1
Manihot esculenta
cassava43227.valid.m1
N
Ciclev10001200m.g
Citrus clementina
Ciclev10001200m.g
N
F775_32837
Aegilops tauschii
F775_32837
N
gene27615-v1.0-hybrid
Fragaria vesca
gene27615-v1.0-hybrid
N
GSMUA_Achr10G04530_001
Musa acuminata
GSMUA_Achr10G04530_001
N
GSMUA_Achr11G09000_001
Musa acuminata
GSMUA_Achr11G09000_001
N
GSMUA_Achr7G23330_001
Musa acuminata
GSMUA_Achr7G23330_001
N
LjSGA_024981.1
Lotus japonicus
LjSGA_024981.1
N
mgf025137m
Mimulus guttatus
mgf025137m
N
orange1.1g036240m.g
Citrus sinensis
orange1.1g036240m.g
N
PDK_20s1369501g001
Phoenix dactylifera
PDK_20s1369501g001
N
Pm022531
Prunus mume
Pm022531
N
POPTR_0005s06040
Populus trichocarpa
POPTR_0005s06040
N
POPTR_0007s03840
Populus trichocarpa
POPTR_0007s03840
N
PRUPE_ppa006028mg
Prunus persica
PRUPE_ppa006028mg
N
PRUPE_ppa007941mg
Prunus persica
PRUPE_ppa007941mg
N
Solyc11g005920.1
Solanum lycopersicum
Solyc11g005920.1
N
Thhalv10004501m.g
Eutrema salsugineum
Thhalv10004501m.g
I
Traes_1AL_C4FA8404A
Triticum aestivum
Traes_1AL_C4FA8404A
N
Traes_1BL_9018AA7BA
Triticum aestivum
Traes_1BL_9018AA7BA
N
Traes_1DL_F410CF9FD
Triticum aestivum
Traes_1DL_F410CF9FD
N
TRIUR3_22935
Triticum urartu
TRIUR3_22935
N