CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MTR_4g104020
(
Medicago truncatula
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
MTR_4g104020
T200554_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES91080
GRAS
146
520
LVQLLIACAEAVACRDKSHASVLLSELKSNALVFGSSFQRVASCFVQGLTERLTLIQPIGNNSAGSDTKSMMNIMDAASEEMEEAFKLVYENCPHIQFGHFVANSIILEAFEGESFLHVVDLGMSLGLPHGHQWRGLIQSLADRSSHRVRRLRITAIGLCIARIQVIGEELSIYAKNLGIHLEFSIVEKNLENLKPKDIKVNEKEVLVVNSILQLHCVVKESRGALNAVLQMIHGLSPKVLVMAEQDSGHNGPFFLGRFMESLHYYSAIFDSLDAMLPKYDTKRAKMEQFYFAEEIKNIVSCEGPLRMERHEKVDQWRRRMSRAGFQGSPIKMVVQAKQWLVKNNVCDGYTVVEEKGCLVLGWKSKPIVAVSCWK
Links
Other
GRAS
family TFs
Other
Medicago truncatula
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30147.m013794
Ricinus communis
30147.m013794
N
0.791
cassava33470.m1
Manihot esculenta
cassava33470.m1
N
0.783
Ca_08777
Cicer arietinum
Ca_08777
N
0.904
Ciclev10019777m.g
Citrus clementina
Ciclev10019777m.g
N
0.780
Ciclev10031305m.g
Citrus clementina
Ciclev10031305m.g
N
0.714
Eucgr.H04688
Eucalyptus grandis
Eucgr.H04688
N
0.706
gene22702-v1.0-hybrid
Fragaria vesca
gene22702-v1.0-hybrid
N
0.786
GLYMA05G03020
Glycine max
GLYMA05G03020
N
0.802
GLYMA17G13680
Glycine max
GLYMA17G13680
N
0.794
Gorai.006G270800
Gossypium raimondii
Gorai.006G270800
N
0.761
Lus10017930.g
Linum usitatissimum
Lus10017930.g
N
0.725
mgf020930m
Mimulus guttatus
mgf020930m
N
0.769
orange1.1g037028m.g
Citrus sinensis
orange1.1g037028m.g
N
0.723
orange1.1g040125m.g
Citrus sinensis
orange1.1g040125m.g
N
0.780
PGSC0003DMG400015255
Solanum tuberosum
PGSC0003DMG400015255
N
0.750
Pm024459
Prunus mume
Pm024459
N
0.764
POPTR_0012s09550
Populus trichocarpa
POPTR_0012s09550
N
0.772
POPTR_0015s10310
Populus trichocarpa
POPTR_0015s10310
N
0.777
PRUPE_ppa016418mg
Prunus persica
PRUPE_ppa016418mg
N
0.772
Solyc03g110950.1
Solanum lycopersicum
Solyc03g110950.1
N
0.750
TCM_010708
Theobroma cacao
TCM_010708
N
0.709
TCM_014574
Theobroma cacao
TCM_014574
N
0.786
VIT_17s0000g10300
Vitis vinifera
VIT_17s0000g10300
N
0.745