CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_019165
(
Theobroma cacao
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
TCM_019165
T201615_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY03951
GRAS
236
581
LVHTLMACAEAVQQDNLKLADALVKHIGLLAASQAGAMRKVATYFAEALARRIYRIYPQDSLDPSYTDILQMHFYETCPYLKFAHFTANQAILEAFATANSVHVIDFGLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNSDALQQVGWKLAQLANTIGVEFEFRGFVATSLADLEPEMLEIRPPEVEAVAVNSVFELHRLLARPGGIEKVLSSIKAMKPKILTVVEQEANHNGPFFLDRFTEALHYYSSLFDSLEGSGVGPPSQDLVMSELYLGRQICNVVACEGMDRIERHETLTQWRTRMETAGFSPVHLGSNAYKQASMLLALFAGGDGYRGRFFLMG
Links
Other
GRAS
family TFs
Other
Theobroma cacao
TFs
87 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FRS7
Arabidopsis thaliana
AT3G06250
N
FRS12
Arabidopsis thaliana
AT5G18960
N
Bo3g013440
Brassica oleracea
Bo3g013440
N
Bostr.2570s0035
Boechera stricta
Bostr.2570s0035
N
Bostr.26527s0315
Boechera stricta
Bostr.26527s0315
N
Cagra.0263s0023
Capsella grandiflora
Cagra.0263s0023
N
Cagra.3793s0006
Capsella grandiflora
Cagra.3793s0006
N
Carubv10000255m.g
Capsella rubella
Carubv10000255m.g
N
Carubv10013017m.g
Capsella rubella
Carubv10013017m.g
N
cassava1998.valid.m1
Manihot esculenta
cassava1998.valid.m1
N
Ciclev10004376m.g
Citrus clementina
Ciclev10004376m.g
N
Cucsa.253860
Cucumis sativus
Cucsa.253860
N
evm.TU.supercontig_16.55
Carica papaya
evm.TU.supercontig_16.55
N
gene06133-v1.0-hybrid
Fragaria vesca
gene06133-v1.0-hybrid
N
GLYMA13G28230
Glycine max
GLYMA13G28230
N
GLYMA15G10830
Glycine max
GLYMA15G10830
N
Gorai.006G255400
Gossypium raimondii
Gorai.006G255400
N
MDP0000254218
Malus domestica
MDP0000254218
N
MDP0000295749
Malus domestica
MDP0000295749
N
mgf010461m
Mimulus guttatus
mgf010461m
N
mgf011099m
Mimulus guttatus
mgf011099m
N
orange1.1g004138m.g
Citrus sinensis
orange1.1g004138m.g
N
Pm008044
Prunus mume
Pm008044
N
POPTR_0008s20380
Populus trichocarpa
POPTR_0008s20380
N
POPTR_0010s03000
Populus trichocarpa
POPTR_0010s03000
N
PRUPE_ppa001884mg
Prunus persica
PRUPE_ppa001884mg
N
SapurV1A.0152s0560
Salix purpurea
SapurV1A.0152s0560
N
SapurV1A.0407s0270
Salix purpurea
SapurV1A.0407s0270
N
SapurV1A.1026s0020
Salix purpurea
SapurV1A.1026s0020
N
Solyc10g084220.1
Solanum lycopersicum
Solyc10g084220.1
N
TCM_021065
Theobroma cacao
TCM_021065
N
Thhalv10012731m.g
Eutrema salsugineum
Thhalv10012731m.g
N
Thhalv10020128m.g
Eutrema salsugineum
Thhalv10020128m.g
N
VIT_05s0020g02450
Vitis vinifera
VIT_05s0020g02450
N