CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm000716
(
Prunus mume
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pm000716
T201948_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm000716
GRAS
324
696
LSTLLTQCAQAVASYDQRTASELLKQIRQHSSPYGDATQRLAHYFADGLEARLAGARTPSYSPLISMQISAAEILKAYEVFVTSSPFRTVSNFLANRTILKLAEKETRLHVIDFGISYGFQWPCFIQCLSKRPGGPPMLRITAIELPQPGFRPTERVEETGRRLKKYAERFNVPFEYNVIAQKWETIQFEDLKIDRNEVIVVNCMNRLKHIPDETVMVNSPRDIVLKLIKKINPDLFIHGVVNGTYNSPFFVTRFRAALFHFSALFDVFEASVPREDERRLMFEKYVYGRDILNVIACEGLERVERPETYKQWQVRNVRAGFKQLPVDQELLKKMKRMLKFRGYHNDFRIDEDGHWILQGWKGRTIMALSFWK
Links
Other
GRAS
family TFs
Other
Prunus mume
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava34369.m1
Manihot esculenta
cassava34369.m1
N
0.705
gene30178-v1.0-hybrid
Fragaria vesca
gene30178-v1.0-hybrid
N
0.753
MDP0000287041
Malus domestica
MDP0000287041
N
0.781
MDP0000289783
Malus domestica
MDP0000289783
N
0.778
MDP0000796348
Malus domestica
MDP0000796348
N
0.800
MDP0000851230
Malus domestica
MDP0000851230
N
0.781
Pm000713
Prunus mume
Pm000713
N
0.822
Pm000714
Prunus mume
Pm000714
N
0.738
Pm000717
Prunus mume
Pm000717
N
0.919
PRUPE_ppa002166mg
Prunus persica
PRUPE_ppa002166mg
N
0.922
PRUPE_ppa002392mg
Prunus persica
PRUPE_ppa002392mg
N
0.795
PRUPE_ppa002472mg
Prunus persica
PRUPE_ppa002472mg
N
0.959
PRUPE_ppa002701mg
Prunus persica
PRUPE_ppa002701mg
N
0.741
PRUPE_ppa014789mg
Prunus persica
PRUPE_ppa014789mg
N
0.732
PRUPE_ppa019574mg
Prunus persica
PRUPE_ppa019574mg
N
0.941
PRUPE_ppa026849mg
Prunus persica
PRUPE_ppa026849mg
N
0.954
TCM_041810
Theobroma cacao
TCM_041810
N
0.700