CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10027940m.g
(
Citrus clementina
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Ciclev10027940m.g
T202414_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10027940m
GRAS
311
681
LPGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHISCRTSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLNLIKRINPDVFIHGISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFEREIVGKDALNAIACEGIERVERPETYKQWQARNQRAGFRQLPLDQELVKKVRTKAESNYHQDFVVDVDGHWMLQGWKGRVMFALSVWK
Links
Other
GRAS
family TFs
Other
Citrus clementina
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA035741
Oryza indica
BGIOSGA035741
N
GRMZM2G073779
Zea mays
GRMZM2G073779
N
GRMZM2G159475
Zea mays
GRMZM2G159475
N
GRMZM2G179325
Zea mays
GRMZM2G179325
N
LPERR11G20420
Leersia perrieri
LPERR11G20420
N
LPERR12G13750
Leersia perrieri
LPERR12G13750
N
MLOC_74705
Hordeum vulgare
MLOC_74705
N
OGLUM12G18120
Oryza glumaepatula
OGLUM12G18120
N
OMERI12G11530
Oryza meridionalis
OMERI12G11530
N
ONIVA11G23190
Oryza nivara
ONIVA11G23190
N
OPUNC12G15050
Oryza punctata
OPUNC12G15050
N
ORGLA11G0190300
Oryza glaberrima
ORGLA11G0190300
N
ORUFI11G25540
Oryza rufipogon
ORUFI11G25540
N
ORUFI12G18360
Oryza rufipogon
ORUFI12G18360
N
Pavir.Ha00318
Panicum virgatum
Pavir.Ha00318
N
Pavir.Hb00043
Panicum virgatum
Pavir.Hb00043
N
Pavir.Hb00044
Panicum virgatum
Pavir.Hb00044
N
Pavir.J16280
Panicum virgatum
Pavir.J16280
N
Pavir.J22109
Panicum virgatum
Pavir.J22109
N
Pavir.J28748
Panicum virgatum
Pavir.J28748
N
Sb05g027750
Sorghum bicolor
Sb05g027750
N
Sb08g018940
Sorghum bicolor
Sb08g018940
N
Si025985m.g
Setaria italica
Si025985m.g
N
Traes_4AL_FF199F127
Triticum aestivum
Traes_4AL_FF199F127
N
Traes_4BS_A79538646
Triticum aestivum
Traes_4BS_A79538646
N
Traes_5DL_E275797CE
Triticum aestivum
Traes_5DL_E275797CE
N
TRIUR3_21532
Triticum urartu
TRIUR3_21532
N