CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.G02939
(
Eucalyptus grandis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Eucgr.G02939
T202464_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.G02939.1
GRAS
365
736
LRTLLTLCAQSVAVDDRRSANEMLKQIRQHSSPTGDGMQRMAHYFANGLEARLAGSGTQIYTGIMSKPTSAASVLKAYRLMLAACPFKKISQFFSNKTIMNVAENATRLHIIDFGILYGFPWPCLIKRLSSRPGGPPKIRITGIDFPQPGFKPAERVEETGRRLKNYAKTFGVPFEFNAIAQRWDTIQLEDLRIDKDEVLVVNCMHRLKNLLDETVVTESPRDIVVNLMRKMNPAVFILGVTNGAYSAPFFTSRFREALFHFSTIFDMLDTNVPRDIPERMLIEKELFGWEAMNVIACEGSERIERPETCKQWQVRIMRGGFTPLPLNEEIMETAKDRVKSYYHKDFVIDEDGQWLLLGWKGRIVDAFSTWG
Links
Other
GRAS
family TFs
Other
Eucalyptus grandis
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
27568.m000253
Ricinus communis
27568.m000253
N
0.768
Aquca_009_00954
Aquilegia coerulea
Aquca_009_00954
N
0.724
cassava15723.m1
Manihot esculenta
cassava15723.m1
N
0.746
cassava31335.valid.m1
Manihot esculenta
cassava31335.valid.m1
N
0.768
Ciclev10011141m.g
Citrus clementina
Ciclev10011141m.g
N
0.703
Ciclev10030787m.g
Citrus clementina
Ciclev10030787m.g
N
0.786
Eucgr.G02940
Eucalyptus grandis
Eucgr.G02940
N
0.882
Eucgr.G02941
Eucalyptus grandis
Eucgr.G02941
N
0.911
evm.TU.supercontig_1.422
Carica papaya
evm.TU.supercontig_1.422
N
0.724
Gorai.010G201000
Gossypium raimondii
Gorai.010G201000
N
0.773
Gorai.011G266200
Gossypium raimondii
Gorai.011G266200
N
0.808
Lus10023404.g
Linum usitatissimum
Lus10023404.g
N
0.751
Lus10040284.g
Linum usitatissimum
Lus10040284.g
N
0.738
mgf014897m
Mimulus guttatus
mgf014897m
N
0.741
orange1.1g004488m.g
Citrus sinensis
orange1.1g004488m.g
N
0.789
orange1.1g004514m.g
Citrus sinensis
orange1.1g004514m.g
N
0.703
PGSC0003DMG400006352
Solanum tuberosum
PGSC0003DMG400006352
N
0.740
Pm018822
Prunus mume
Pm018822
N
0.754
POPTR_0008s05750
Populus trichocarpa
POPTR_0008s05750
N
0.754
XM_002316242.1
Populus trichocarpa
POPTR_0010s20980
N
0.734
PRUPE_ppa021438mg
Prunus persica
PRUPE_ppa021438mg
N
0.746
SapurV1A.0001s1700
Salix purpurea
SapurV1A.0001s1700
N
0.718
SapurV1A.0451s0060
Salix purpurea
SapurV1A.0451s0060
N
0.757
TCM_042705
Theobroma cacao
TCM_042705
N
0.818
VIT_13s0019g01700
Vitis vinifera
VIT_13s0019g01700
N
0.737
VIT_13s0019g01810
Vitis vinifera
VIT_13s0019g01810
N
0.732