CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSMEUG00000015192
(
Macropus eugenii
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSMEUG00000015192
T211436_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Six4
M00461_2.00
Mus musculus
NNKABMHNN
NNDKVTMNN
PBM
Berger et al.(2008)
Six4_2860
0.867
1.000
SIX4
M04939_2.00
Homo sapiens
NVYGATACVB
VBGTATCRBN
SELEX
Yin et al.(2017)
SIX4_eDBD_HT-SELEX
0.867
1.000
Six4
M09198_2.00
Mus musculus
DGDAABHNSASNNN
NNNSTSNDVTTHCH
Misc
Kulakovskiy et al.(2013)
SIX4_MOUSE.H11MO.0.C
0.867
1.000
SIX4
M10646_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SIX4_Q3
0.867
1.000
SIX4
M04940_2.00
Homo sapiens
NBGTAWCRHN
NDYGWTACVN
SELEX
Yin et al.(2017)
SIX4_eDBD_Methyl-HT-SELEX
0.867
1.000
Six4
M00563_2.00
Drosophila melanogaster
NNDANMHNN
NNDKNTHNN
PBM
Busser et al.(2012a)
Six4
0.827
0.792
Six4
M06530_2.00
Drosophila melanogaster
TGABAC
GTVTCA
B1H
Mathelier et al.(2014)
MA0204.1
0.827
0.792
Six4
M06334_2.00
Drosophila melanogaster
WDDTGABAC
GTVTCAHHW
B1H
Zhu et al.(2011)
Six4_Cell_FBgn0027364
0.827
0.792
Six4
M06335_2.00
Drosophila melanogaster
NTGAKACB
VGTMTCAN
B1H
Zhu et al.(2011)
Six4_SOLEXA_2_FBgn0027364
0.827
0.792
Six4
M06336_2.00
Drosophila melanogaster
NNNTGABA
TVTCANNN
B1H
Zhu et al.(2011)
Six4_SOLEXA_FBgn0027364
0.827
0.792
SIX5
M08208_2.00
Homo sapiens
GARWTGTAGT
ACTACAWYTC
ChIP-seq
Contrino et al.(2012)
Mv121
0.826
0.774
SIX5
M08209_2.00
Homo sapiens
GGAGTTGT
ACAACTCC
ChIP-seq
Contrino et al.(2012)
Mv123
0.826
0.774
SIX5
M10738_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SIX5_01
0.826
0.774
SIX5
M10739_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SIX5_02
0.826
0.774
Six2
M00425_2.00
Mus musculus
NNAYMYNN
NNRKRTNN
PBM
Berger et al.(2008)
Six2_2307
0.708
0.736
Six1
M00512_2.00
Mus musculus
NNDATMYNNN
NNNRKATHNN
PBM
Berger et al.(2008)
Six1_0935
0.708
0.736
SIX1
M05094_2.00
Homo sapiens
NNYGATACVB
VBGTATCRNN
SELEX
Yin et al.(2017)
SIX1_eDBD_HT-SELEX
0.708
0.736
SIX1
M05096_2.00
Homo sapiens
NNYGATAYVB
VBRTATCRNN
SELEX
Yin et al.(2017)
SIX1_FL_HT-SELEX
0.708
0.736
SIX2
M05285_2.00
Homo sapiens
NNYGATACSB
VSGTATCRNN
SELEX
Yin et al.(2017)
SIX2_eDBD_HT-SELEX
0.708
0.736
SIX2
M05287_2.00
Homo sapiens
NSGTRWCRYN
NRYGWYACSN
SELEX
Yin et al.(2017)
SIX2_FL_HT-SELEX
0.708
0.736
SIX1
M08130_2.00
Homo sapiens
GWAACCTGANM
KNTCAGGTTWC
ChIP-seq
Mathelier et al.(2014)
MA1118.1
0.708
0.736
SIX2
M08133_2.00
Homo sapiens
NNNTGWAACCTGAKMH
DKMTCAGGTTWCANNN
ChIP-seq
Mathelier et al.(2014)
MA1119.1
0.708
0.736
SIX1
M09142_2.00
Homo sapiens
DGWAAYHTGABMYN
NRKVTCADRTTWCH
Misc
Kulakovskiy et al.(2013)
SIX1_HUMAN.H11MO.0.A
0.708
0.736
SIX2
M09157_2.00
Homo sapiens
DGWAAYHHGABMH
DKVTCDDRTTWCH
Misc
Kulakovskiy et al.(2013)
SIX2_HUMAN.H11MO.0.A
0.708
0.736
Six2
M09185_2.00
Mus musculus
DGWAAYHYRABMYB
VRKVTYRDRTTWCH
Misc
Kulakovskiy et al.(2013)
SIX2_MOUSE.H11MO.0.A
0.708
0.736
Six1
M09579_2.00
Mus musculus
GWAAYHTGABMH
DKVTCADRTTWC
Misc
Heinz et al.(2010)
Myoblast-Six1_GSE20150
0.708
0.736
SIX1
M10684_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SIX1_Q3_01
0.708
0.736
SIX1
M10685_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SIX1_Q3
0.708
0.736
SIX1
M05095_2.00
Homo sapiens
NNYGATABNB
VNVTATCRNN
SELEX
Yin et al.(2017)
SIX1_eDBD_Methyl-HT-SELEX
0.708
0.736
SIX1
M05097_2.00
Homo sapiens
NNYGATAYSB
VSRTATCRNN
SELEX
Yin et al.(2017)
SIX1_FL_Methyl-HT-SELEX
0.708
0.736
SIX2
M05286_2.00
Homo sapiens
NBRTATCRNN
NNYGATAYVN
SELEX
Yin et al.(2017)
SIX2_eDBD_Methyl-HT-SELEX
0.708
0.736
SIX2
M05288_2.00
Homo sapiens
VBRTAWCRNN
NNYGWTAYVB
SELEX
Yin et al.(2017)
SIX2_FL_Methyl-HT-SELEX
0.708
0.736
so
M02117_2.00
Drosophila melanogaster
NDATMYNNN
NNNRKATHN
PBM
Weirauch et al.(2014)
pTH5690
0.708
0.717
so
M03800_2.00
Drosophila melanogaster
NYGATAYB
VRTATCRN
SELEX
Nitta et al.(2015)
so_1
0.708
0.717
so
M03801_2.00
Drosophila melanogaster
YKATAYNNNYGATAY
RTATCRNNNRTATMR
SELEX
Nitta et al.(2015)
so_2
0.708
0.717
so
M03802_2.00
Drosophila melanogaster
YGATACGTATCR
YGATACGTATCR
SELEX
Nitta et al.(2015)
so_3
0.708
0.717
so
M03803_2.00
Drosophila melanogaster
RTATCRYGATAC
GTATCRYGATAY
SELEX
Nitta et al.(2015)
so_4
0.708
0.717
so
M06497_2.00
Drosophila melanogaster
TGATAC
GTATCA
B1H
Mathelier et al.(2014)
MA0246.1
0.708
0.717
so
M06268_2.00
Drosophila melanogaster
NRTGATA
TATCAYN
B1H
Zhu et al.(2011)
So_Cell_FBgn0003460
0.708
0.717
so
M06269_2.00
Drosophila melanogaster
NNNTGATA
TATCANNN
B1H
Zhu et al.(2011)
So_SOLEXA_FBgn0003460
0.708
0.717
ceh-34
M00672_2.00
Caenorhabditis elegans
NNNRDAWNNN
NNNWTHYNNN
PBM
Narasimhan et al.(2015)
pTH9708
0.634
0.604
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMEUP00000013866
Homeodomain
135
187
YCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRN
Links
Other
Homeodomain
family TFs
Other
Macropus eugenii
TFs
542 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAG42360
Xenopus laevis
AAG42360
I
0.669
ACOC_0000476701
Angiostrongylus costaricensis
ACOC_0000476701
I
0.636
AEPI004527
Anopheles epiroticus
AEPI004527
I
0.686
ALUE_0001606301
Ascaris lumbricoides
ALUE_0001606301
I
0.706
ANCCAN_04663
Ancylostoma caninum
ANCCAN_04663
I
0.636
ANCCAN_17774
Ancylostoma caninum
ANCCAN_17774
I
0.690
ANCCEY_02921
Ancylostoma ceylanicum
ANCCEY_02921
I
0.636
ANCDUO_14011
Ancylostoma duodenale
ANCDUO_14011
I
0.636
ASU_03328
Ascaris suum
ASU_03328
I
0.706
BXY_0538000
Bursaphelenchus xylophilus
BXY_0538000
I
0.642
BXY_0724500
Bursaphelenchus xylophilus
BXY_0724500
I
0.706
CBG06765
Caenorhabditis briggsae
CBG06765
I
0.636
CJA04595
Caenorhabditis japonica
CJA04595
I
0.636
CJA17634
Caenorhabditis japonica
CJA17634
I
0.649
CPIJ001629
Culex quinquefasciatus
CPIJ001629
N
CRE30662
Caenorhabditis remanei
CRE30662
I
0.635
csin101057
Clonorchis sinensis
csin101057
I
0.708
D915_02388
Fasciola hepatica
D915_02388
I
0.690
D915_07194
Fasciola hepatica
D915_07194
I
0.708
D917_07801
Trichinella nativa
D917_07801
I
0.667
D917_09984
Trichinella nativa
D917_09984
I
0.708
D918_03949
Trichuris suis
D918_03949
I
0.666
D918_06277
Trichuris suis
D918_06277
I
0.708
DAPPUDRAFT_27769
Daphnia pulex
DAPPUDRAFT_27769
I
0.682
DICVIV_00175
Dictyocaulus viviparus
DICVIV_00175
I
0.636
DICVIV_09734
Dictyocaulus viviparus
DICVIV_09734
I
0.690
DILT_0000882401
Diphyllobothrium latum
DILT_0000882401
I
0.706
DILT_0001065601
Diphyllobothrium latum
DILT_0001065601
I
0.702
DME_0000167101
Dracunculus medinensis
DME_0000167101
I
0.706
ECANG7_09328
Echinococcus canadensis
ECANG7_09328
I
0.693
ECPE_0000338001
Echinostoma caproni
ECPE_0000338001
I
0.708
EEL_0000346701
Elaeophora elaphi
EEL_0000346701
I
0.706
EmuJ_000380700
Echinococcus multilocularis
EmuJ_000380700
I
0.706
six9
Gasterosteus aculeatus
ENSGACG00000009726
I
0.699
ENSONIG00000003683
Oreochromis niloticus
ENSONIG00000003683
I
0.698
ENSOPRG00000001635
Ochotona princeps
ENSOPRG00000001635
I
0.654
ENSPFOG00000009821
Poecilia formosa
ENSPFOG00000009821
I
0.683
ENSXMAG00000004316
Xiphophorus maculatus
ENSXMAG00000004316
I
0.682
ENSXMAG00000016855
Xiphophorus maculatus
ENSXMAG00000016855
I
0.700
EVEC_0000317101
Enterobius vermicularis
EVEC_0000317101
I
0.674
EVEC_0001275801
Enterobius vermicularis
EVEC_0001275801
I
0.706
genemark-nMf.1.1.scaf01562-processed-gene-0.5
Meloidogyne floridensis
genemark-nMf.1.1.scaf01562-processed-gene-0.5
I
0.706
GPLIN_000794900
Globodera pallida
GPLIN_000794900
I
0.708
GPUH_0002227501
Gongylonema pulchrum
GPUH_0002227501
I
0.706
Hba_21358
Heterorhabditis bacteriophora
Hba_21358
I
0.632
HCOI01973100
Haemonchus contortus
HCOI01973100
I
0.636
HDID_0000463301
Hymenolepis diminuta
HDID_0000463301
I
0.706
HelroG89655
Helobdella robusta
HelroG89655
I
0.706
HmN_000892800
Hymenolepis microstoma
HmN_000892800
I
0.706
HNAJ_0000203501
Hymenolepis nana
HNAJ_0000203501
I
0.706
HPBE_0001019701
Heligmosomoides bakeri
HPBE_0001019701
I
0.636
HPLM_0000360201
Haemonchus placei
HPLM_0000360201
I
0.636
L596_g18897
Steinernema carpocapsae
L596_g18897
I
0.706
L596_g5268
Steinernema carpocapsae
L596_g5268
I
0.635
L889_g21465
Steinernema feltiae
L889_g21465
I
0.706
L889_g24082
Steinernema feltiae
L889_g24082
I
0.623
L889_g4748
Steinernema feltiae
L889_g4748
I
0.692
L892_g14526
Steinernema scapterisci
L892_g14526
I
0.635
L892_g28534
Steinernema scapterisci
L892_g28534
I
0.706
L893_g18126
Steinernema glaseri
L893_g18126
I
0.706
L898_g17991
Steinernema monticolum
L898_g17991
I
0.625
L898_g25131
Steinernema monticolum
L898_g25131
I
0.706
LOAG_06716
Loa loa
LOAG_06716
I
0.706
LotgiG129577
Lottia gigantea
LotgiG129577
I
0.706
maker-nMf.1.1.scaf07913-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf07913-snap-gene-0.4
I
0.657
MCOS_0000037001
Mesocestoides corti
MCOS_0000037001
I
0.706
MCOS_0000777701
Mesocestoides corti
MCOS_0000777701
I
0.693
MDOA013536
Musca domestica
MDOA013536
I
0.708
MhA1_Contig1493.frz3.gene10
Meloidogyne hapla
MhA1_Contig1493.frz3.gene10
I
0.657
Minc12220
Meloidogyne incognita
Minc12220
I
0.706
Minc17622
Meloidogyne incognita
Minc17622
I
0.657
ML174732a
Mnemiopsis leidyi
ML174732a
I
0.700
nAv.1.0.1.g08072
Acanthocheilonema viteae
nAv.1.0.1.g08072
I
0.706
NBR_0001256601
Nippostrongylus brasiliensis
NBR_0001256601
I
0.636
nDi.2.2.2.g01299
Dirofilaria immitis
nDi.2.2.2.g01299
I
0.706
NECAME_04786
Necator americanus
NECAME_04786
I
0.636
NEMVEDRAFT_v1g157078
Nematostella vectensis
NEMVEDRAFT_v1g157078
I
0.706
NEMVEDRAFT_v1g99489
Nematostella vectensis
NEMVEDRAFT_v1g99489
I
0.647
nLs.2.1.2.g00373
Litomosoides sigmodontis
nLs.2.1.2.g00373
I
0.706
nLs.2.1.2.g03086
Litomosoides sigmodontis
nLs.2.1.2.g03086
I
0.607
nOo.2.0.1.g05850
Onchocerca ochengi
nOo.2.0.1.g05850
I
0.706
nRc.2.0.1.g25017
Romanomermis culicivorax
nRc.2.0.1.g25017
I
0.708
OESDEN_12835
Oesophagostomum dentatum
OESDEN_12835
I
0.636
OESDEN_17087
Oesophagostomum dentatum
OESDEN_17087
I
0.690
PEQ_0000660801
Parascaris equorum
PEQ_0000660801
I
0.605
PPA01868
Pristionchus pacificus
PPA01868
I
0.652
PPA14204
Pristionchus pacificus
PPA14204
I
0.690
PTRK_0000070200
Parastrongyloides trichosuri
PTRK_0000070200
I
0.706
PXEA_0002133501
Protopolystoma xenopodis
PXEA_0002133501
I
0.649
RSKR_0000334300
Rhabditophanes kr3021
RSKR_0000334300
I
0.707
RSKR_0000416900
Rhabditophanes kr3021
RSKR_0000416900
I
0.689
SBAD_0000427501
Soboliphyme baturini
SBAD_0000427501
I
0.708
scaffold301-EXSNAP2012.17
Pristionchus exspectatus
scaffold301-EXSNAP2012.17
I
0.652
Sjc_0079530
Schistosoma japonicum
Sjc_0079530
I
0.678
Smp_127240
Schistosoma mansoni
Smp_127240
I
0.600
SMU15013784
Schmidtea mediterranea
SMU15013784
I
0.634
SMU15015459
Schmidtea mediterranea
SMU15015459
I
0.706
SMUV_0000599301
Syphacia muris
SMUV_0000599301
I
0.674
SMUV_0000910101
Syphacia muris
SMUV_0000910101
I
0.706
SNAPOd2T00015814001
Oikopleura dioica
SNAPOd2T00015814001
I
0.690
SPAL_0000422700
Strongyloides papillosus
SPAL_0000422700
I
0.706
SPER_0002594901
Spirometra erinaceieuropaei
SPER_0002594901
I
0.706
SPER_0003696901
Spirometra erinaceieuropaei
SPER_0003696901
I
0.706
SROB_0001144101
Schistosoma rodhaini
SROB_0001144101
I
0.600
SSLN_0000162601
Schistocephalus solidus
SSLN_0000162601
I
0.599
SSLN_0001659401
Schistocephalus solidus
SSLN_0001659401
I
0.706
SSTP_0000742900
Strongyloides stercoralis
SSTP_0000742900
I
0.706
SVE_1642700
Strongyloides venezuelensis
SVE_1642700
I
0.706
TASK_0000361501
Taenia asiatica
TASK_0000361501
I
0.693
TASK_0000701601
Taenia asiatica
TASK_0000701601
I
0.706
TCLT_0000291601
Thelazia callipaeda
TCLT_0000291601
I
0.647
TELCIR_05419
Teladorsagia circumcincta
TELCIR_05419
I
0.636
TELCIR_05653
Teladorsagia circumcincta
TELCIR_05653
I
0.690
TELCIR_14165
Teladorsagia circumcincta
TELCIR_14165
I
0.690
TMUE_s0223000500
Trichuris muris
TMUE_s0223000500
I
0.708
TriadG5673
Trichoplax adhaerens
TriadG5673
I
0.670
TsM_000260800
Taenia solium
TsM_000260800
I
0.706
TsM_000783900
Taenia solium
TsM_000783900
I
0.693
TTAC_0000312701
Hydatigera taeniaeformis
TTAC_0000312701
I
0.693
TTRE_0000099501
Trichuris trichiura
TTRE_0000099501
I
0.708
TTRE_0000529701
Trichuris trichiura
TTRE_0000529701
I
0.666
ceh-34
Caenorhabditis elegans
WBGene00000455
D
0.634
WBGene00244068
Onchocerca volvulus
WBGene00244068
I
0.706
WUBG_09144
Wuchereria bancrofti
WUBG_09144
I
0.706
YQE_03710
Dendroctonus ponderosae
YQE_03710
I
0.599