TCM_008214 (Theobroma cacao)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 TCM_008214 T223894_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00 		Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432 		0.668 0.772
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOX99522 Homeodomain 26 82
EOX99523 Homeodomain 26 82
EOX99524 Homeodomain 26 82
EOX99525 Homeodomain 1 35
EOX99526 Homeodomain 26 82

Links

Other Homeodomain family TFs
Other Theobroma cacao TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOC_0001009801 Angiostrongylus costaricensis ACOC_0001009801 I 0.000
ALUE_0000559201 Ascaris lumbricoides ALUE_0000559201 I 0.000
ASU_05583 Ascaris suum ASU_05583 I 0.000
Bm5392 Brugia malayi Bm5392 I 0.000
BTMF_0000986201 Brugia timori BTMF_0000986201 I 0.000
GPLIN_001276900 Globodera pallida GPLIN_001276900 I 0.000
L596_g21623 Steinernema carpocapsae L596_g21623 I 0.000
L889_g26642 Steinernema feltiae L889_g26642 I 0.000
L892_g28207 Steinernema scapterisci L892_g28207 I 0.000
L893_g8649 Steinernema glaseri L893_g8649 I 0.000
MhA1_Contig353.frz3.fgene4 Meloidogyne hapla MhA1_Contig353.frz3.fgene4 I 0.000
nAv.1.0.1.g02965 Acanthocheilonema viteae nAv.1.0.1.g02965 I 0.000
nDi.2.2.2.g01961 Dirofilaria immitis nDi.2.2.2.g01961 I 0.000
nLs.2.1.2.g00563 Litomosoides sigmodontis nLs.2.1.2.g00563 I 0.000
nOo.2.0.1.g05753 Onchocerca ochengi nOo.2.0.1.g05753 I 0.000
nOo.2.0.1.g07140 Onchocerca ochengi nOo.2.0.1.g07140 I 0.000
OFLC_0000193701 Onchocerca flexuosa OFLC_0000193701 I 0.000
PTRK_0000872800 Parastrongyloides trichosuri PTRK_0000872800 I 0.000
RSKR_0000006600 Rhabditophanes kr3021 RSKR_0000006600 I 0.000
SMUV_0000148401 Syphacia muris SMUV_0000148401 I 0.000
snap_masked-nMf.1.1.scaf25582-processed-gene-0.1 Meloidogyne floridensis snap_masked-nMf.1.1.scaf25582-processed-gene-0.1 I 0.000
SPAL_0000140300 Strongyloides papillosus SPAL_0000140300 I 0.000
SVE_0221800 Strongyloides venezuelensis SVE_0221800 I 0.000
TCLT_0000249001 Thelazia callipaeda TCLT_0000249001 I 0.000
TCNE_0000984601 Toxocara canis TCNE_0000984601 I 0.000
daf-16 Caenorhabditis elegans WBGene00000912 D 0.000
WBGene00237302 Onchocerca volvulus WBGene00237302 I 0.000
WUBG_10392 Wuchereria bancrofti WUBG_10392 I 0.000