A_06158 (Schistosoma haematobium)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 A_06158 T232726_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
six3
M02102_2.00 		Oryzias latipes
NNDAYMBNNN
NNNVKRTHNN		 PBM
Weirauch et al.(2014)
pTH5928 		0.867 0.947
SIX6
M00326_2.00 		Homo sapiens
NNDATMB
VKATHNN		 PBM
Barrera et al.(2016)
SIX6_REF 		0.865 0.930
Six6
M00169_2.00 		Mus musculus
NNAYMNN
NNKRTNN		 PBM
Badis et al.(2009)
Six6_2267 		0.865 0.930
Six6
M00412_2.00 		Mus musculus
NNNTGATAYCN
NGRTATCANNN		 PBM
Berger et al.(2008)
Six6_2267 		0.865 0.930
Six3
M00483_2.00 		Mus musculus
NNNAYMN
NKRTNNN		 PBM
Berger et al.(2008)
Six3_1732 		0.865 0.930
SIX3
M05159_2.00 		Homo sapiens
NNYGATABBN
NVVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX 		0.865 0.930
SIX6
M05357_2.00 		Homo sapiens
NNYGATASVB
VBSTATCRNN		 SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX 		0.865 0.930
SIX3
M10698_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX3_Q6 		0.865 0.930
SIX6
M00325_2.00 		Homo sapiens
NNNDATMB
VKATHNNN		 PBM
Barrera et al.(2016)
SIX6_H141N 		0.865 0.930
SIX3
M05160_2.00 		Homo sapiens
NNYGATABVB
VBVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX 		0.865 0.930
SIX6
M05358_2.00 		Homo sapiens
VBVYAYCRNN
NNYGRTRBVB		 SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX 		0.865 0.930
Optix
M02124_2.00 		Drosophila melanogaster
NNNNNDATMN
NKATHNNNNN		 PBM
Weirauch et al.(2014)
pTH5437 		0.865 0.912
Optix
M03850_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
Optix_1 		0.865 0.912
Optix
M06526_2.00 		Drosophila melanogaster
TGATA
TATCA		 B1H
Mathelier et al.(2014)
MA0199.1 		0.865 0.912
Optix
M06327_2.00 		Drosophila melanogaster
HHVTGATA
TATCABDD		 B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360 		0.865 0.912
Optix
M06328_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360 		0.865 0.912
SIX6
M00327_2.00 		Homo sapiens
NHDAYMBNN
NNVKRTHDN		 PBM
Barrera et al.(2016)
SIX6_T165A 		0.859 0.912
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
A_06158 Homeodomain 426 482

Links

Other Homeodomain family TFs
Other Schistosoma haematobium TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29814.m000736 Ricinus communis 29814.m000736 I
AC213884.3_FG002 Zea mays AC213884.3_FG002 N
MYB25 Arabidopsis lyrata Al_scaffold_0004_2572 I
Aquca_007_00776 Aquilegia coerulea Aquca_007_00776 I
Aquca_045_00169 Aquilegia coerulea Aquca_045_00169 I
Aquca_083_00054 Aquilegia coerulea Aquca_083_00054 I
F3A4.140 Arabidopsis thaliana AT3G50060 D
MYB44 Arabidopsis thaliana AT5G67300 D
BGIOSGA018238 Oryza indica BGIOSGA018238 I
BGIOSGA018239 Oryza indica BGIOSGA018239 I
Bo2g167960 Brassica oleracea Bo2g167960 I
Bo7g063830 Brassica oleracea Bo7g063830 I
Bo7g099180 Brassica oleracea Bo7g099180 I
Bo8g079430 Brassica oleracea Bo8g079430 I
Bostr.0568s0154 Boechera stricta Bostr.0568s0154 I
Bostr.6864s0236 Boechera stricta Bostr.6864s0236 I
Bra012149 Brassica rapa Bra012149 I
Bra012910 Brassica rapa Bra012910 I
Bra036048 Brassica rapa Bra036048 I
BRADI2G28910 Brachypodium distachyon BRADI2G28910 N
Cagra.0342s0017 Capsella grandiflora Cagra.0342s0017 I
Cagra.1549s0005 Capsella grandiflora Cagra.1549s0005 I
Carubv10019440m.g Capsella rubella Carubv10019440m.g I
Carubv10027659m.g Capsella rubella Carubv10027659m.g I
cassava41257.m1 Manihot esculenta cassava41257.m1 I
cassava47374.m1 Manihot esculenta cassava47374.m1 I
Ca_12468 Cicer arietinum Ca_12468 I
chr2.CM0002.110.nc Lotus japonicus chr2.CM0002.110.nc I
Cla004431 Citrullus lanatus Cla004431 I
Cla020946 Citrullus lanatus Cla020946 I
Cla022947 Citrullus lanatus Cla022947 I
CM0528.210.nd Lotus japonicus CM0528.210.nd I
Cucsa.368410 Cucumis sativus Cucsa.368410 I
Cucsa.395890 Cucumis sativus Cucsa.395890 I
Eucgr.E02958 Eucalyptus grandis Eucgr.E02958 I
Eucgr.F00002 Eucalyptus grandis Eucgr.F00002 I
MYB77 Arabidopsis lyrata fgenesh2_kg.5__1356__AT3G50060.1 I
gene21001-v1.0-hybrid Fragaria vesca gene21001-v1.0-hybrid I
GLYMA05G21220 Glycine max GLYMA05G21220 I
GLYMA14G09540 Glycine max GLYMA14G09540 I
GLYMA17G35620 Glycine max GLYMA17G35620 I
Gorai.002G009300 Gossypium raimondii Gorai.002G009300 I
Gorai.005G234900 Gossypium raimondii Gorai.005G234900 I
Gorai.010G023500 Gossypium raimondii Gorai.010G023500 I
Gorai.012G149000 Gossypium raimondii Gorai.012G149000 I
GRMZM2G145444 Zea mays GRMZM2G145444 I
GRMZM2G369799 Zea mays GRMZM2G369799 I
GSMUA_Achr1G26140_001 Musa acuminata GSMUA_Achr1G26140_001 I
GSMUA_Achr3G13070_001 Musa acuminata GSMUA_Achr3G13070_001 I
GSMUA_Achr3G28230_001 Musa acuminata GSMUA_Achr3G28230_001 I
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I
GSMUA_Achr9G22600_001 Musa acuminata GSMUA_Achr9G22600_001 I
GSMUA_AchrUn_randomG01280_001 Musa acuminata GSMUA_AchrUn_randomG01280_001 I
LPERR02G05810 Leersia perrieri LPERR02G05810 I
LPERR05G10150 Leersia perrieri LPERR05G10150 I
Lus10007503.g Linum usitatissimum Lus10007503.g I
Lus10010238.g Linum usitatissimum Lus10010238.g I
Lus10014103.g Linum usitatissimum Lus10014103.g I
Lus10028979.g Linum usitatissimum Lus10028979.g I
Lus10040940.g Linum usitatissimum Lus10040940.g I
MDP0000187872 Malus domestica MDP0000187872 I
mgf014089m Mimulus guttatus mgf014089m I
mgf020432m Mimulus guttatus mgf020432m I
mgf023922m Mimulus guttatus mgf023922m I
MLOC_26177 Hordeum vulgare MLOC_26177 N
MTR_4g094982 Medicago truncatula MTR_4g094982 I
OGLUM05G13590 Oryza glumaepatula OGLUM05G13590 I
OMERI05G11510 Oryza meridionalis OMERI05G11510 I
OPUNC05G11020 Oryza punctata OPUNC05G11020 I
ORGLA05G0109400 Oryza glaberrima ORGLA05G0109400 I
ORUFI05G13850 Oryza rufipogon ORUFI05G13850 I
Pavir.Ab00649 Panicum virgatum Pavir.Ab00649 I
Pavir.Ca02945 Panicum virgatum Pavir.Ca02945 I
Pavir.Cb00156 Panicum virgatum Pavir.Cb00156 I
Pavir.J23512 Panicum virgatum Pavir.J23512 I
Pavir.J33236 Panicum virgatum Pavir.J33236 I
PGSC0003DMG400003316 Solanum tuberosum PGSC0003DMG400003316 I
PK17282.1 Cannabis sativa PK17282.1 I
POPTR_0005s18620 Populus trichocarpa POPTR_0005s18620 I
POPTR_0008s07100 Populus trichocarpa POPTR_0008s07100 I
POPTR_0009s09890 Populus trichocarpa POPTR_0009s09890 I
SapurV1A.0650s0070 Salix purpurea SapurV1A.0650s0070 I
Sb04g005940 Sorghum bicolor Sb04g005940 I
Sb09g016570 Sorghum bicolor Sb09g016570 I
ATMYBR1 Arabidopsis lyrata scaffold_803378.1 I
Si017917m.g Setaria italica Si017917m.g I
Si024344m.g Setaria italica Si024344m.g I
Solyc04g078420.1 Solanum lycopersicum Solyc04g078420.1 I
TCM_007138 Theobroma cacao TCM_007138 I
TCM_042474 Theobroma cacao TCM_042474 I
Thhalv10004676m.g Eutrema salsugineum Thhalv10004676m.g I
Thhalv10010581m.g Eutrema salsugineum Thhalv10010581m.g I
VIT_13s0067g01360 Vitis vinifera VIT_13s0067g01360 I