BGIOSGA018239 (Oryza indica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BGIOSGA018239 T266863_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.675 0.731
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.675 0.731
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.675 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA018239-PA Myb 20 66
BGIOSGA018239-PA Myb 72 117

Links

Other Myb/SANT family TFs
Other Oryza indica TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ONIVA05G13470 Oryza nivara ONIVA05G13470 I 0.897
OPUNC05G11020 Oryza punctata OPUNC05G11020 I 0.897
ORGLA05G0109400 Oryza glaberrima ORGLA05G0109400 I 0.897
ORUFI05G13850 Oryza rufipogon ORUFI05G13850 I 0.897
OGLUM05G13590 Oryza glumaepatula OGLUM05G13590 I 0.897
OMERI05G11510 Oryza meridionalis OMERI05G11510 I 0.897
BGIOSGA018238 Oryza indica BGIOSGA018238 I 0.875
LPERR05G10150 Leersia perrieri LPERR05G10150 I 0.800
Pavir.J33236 Panicum virgatum Pavir.J33236 I 0.770
Si024344m.g Setaria italica Si024344m.g I 0.761
Sb09g016570 Sorghum bicolor Sb09g016570 I 0.752
AC213884.3_FG002 Zea mays AC213884.3_FG002 N 0.743
MLOC_26177 Hordeum vulgare MLOC_26177 N 0.712
BRADI2G28910 Brachypodium distachyon BRADI2G28910 N 0.706
Lus10040940.g Linum usitatissimum Lus10040940.g I 0.695
Cagra.1549s0005 Capsella grandiflora Cagra.1549s0005 I 0.690
Bo8g079430 Brassica oleracea Bo8g079430 I 0.690
MYB77 Arabidopsis lyrata fgenesh2_kg.5__1356__AT3G50060.1 I 0.690
Thhalv10010581m.g Eutrema salsugineum Thhalv10010581m.g I 0.690
Carubv10019440m.g Capsella rubella Carubv10019440m.g I 0.690
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I 0.687
Bostr.6864s0236 Boechera stricta Bostr.6864s0236 I 0.687
Lus10028979.g Linum usitatissimum Lus10028979.g I 0.685
GSMUA_Achr1G26140_001 Musa acuminata GSMUA_Achr1G26140_001 I 0.683
GSMUA_Achr3G28230_001 Musa acuminata GSMUA_Achr3G28230_001 I 0.680
TCM_007138 Theobroma cacao TCM_007138 I 0.678
GSMUA_Achr3G13070_001 Musa acuminata GSMUA_Achr3G13070_001 I 0.678
Cucsa.368410 Cucumis sativus Cucsa.368410 I 0.678
ATMYBR1 Arabidopsis lyrata scaffold_803378.1 I 0.675
mgf023922m Mimulus guttatus mgf023922m I 0.675
Cagra.0342s0017 Capsella grandiflora Cagra.0342s0017 I 0.675
Bostr.0568s0154 Boechera stricta Bostr.0568s0154 I 0.675
Carubv10027659m.g Capsella rubella Carubv10027659m.g I 0.675
MYB44 Arabidopsis thaliana AT5G67300 D 0.675
Bra012149 Brassica rapa Bra012149 I 0.675
Thhalv10004676m.g Eutrema salsugineum Thhalv10004676m.g I 0.675
Bo7g063830 Brassica oleracea Bo7g063830 I 0.675
Lus10014103.g Linum usitatissimum Lus10014103.g I 0.675
Bo2g167960 Brassica oleracea Bo2g167960 I 0.675
Lus10010238.g Linum usitatissimum Lus10010238.g I 0.674
GLYMA14G09540 Glycine max GLYMA14G09540 I 0.673
Solyc04g078420.1 Solanum lycopersicum Solyc04g078420.1 I 0.673
PGSC0003DMG400003316 Solanum tuberosum PGSC0003DMG400003316 I 0.673
Gorai.005G234900 Gossypium raimondii Gorai.005G234900 I 0.673
GSMUA_Achr9G22600_001 Musa acuminata GSMUA_Achr9G22600_001 I 0.670
GLYMA17G35620 Glycine max GLYMA17G35620 I 0.668
Bra036048 Brassica rapa Bra036048 I 0.667
SapurV1A.0650s0070 Salix purpurea SapurV1A.0650s0070 I 0.666
Aquca_083_00054 Aquilegia coerulea Aquca_083_00054 I 0.666
Cla004431 Citrullus lanatus Cla004431 I 0.666
POPTR_0008s07100 Populus trichocarpa POPTR_0008s07100 I 0.666
29814.m000736 Ricinus communis 29814.m000736 I 0.666
cassava41257.m1 Manihot esculenta cassava41257.m1 I 0.666
gene21001-v1.0-hybrid Fragaria vesca gene21001-v1.0-hybrid I 0.666
TCM_042474 Theobroma cacao TCM_042474 I 0.664
Pavir.J23512 Panicum virgatum Pavir.J23512 I 0.663
Sb04g005940 Sorghum bicolor Sb04g005940 I 0.663
LPERR02G05810 Leersia perrieri LPERR02G05810 I 0.663
Si017917m.g Setaria italica Si017917m.g I 0.663
Aquca_045_00169 Aquilegia coerulea Aquca_045_00169 I 0.663
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I 0.663
GRMZM2G145444 Zea mays GRMZM2G145444 I 0.663
Bra012910 Brassica rapa Bra012910 I 0.662
CM0528.210.nd Lotus japonicus CM0528.210.nd I 0.662
Bo7g099180 Brassica oleracea Bo7g099180 I 0.662
GLYMA05G21220 Glycine max GLYMA05G21220 I 0.662
POPTR_0005s18620 Populus trichocarpa POPTR_0005s18620 I 0.662
mgf020432m Mimulus guttatus mgf020432m I 0.662
Gorai.012G149000 Gossypium raimondii Gorai.012G149000 I 0.662
MTR_4g094982 Medicago truncatula MTR_4g094982 I 0.662
POPTR_0009s09890 Populus trichocarpa POPTR_0009s09890 I 0.662
Aquca_007_00776 Aquilegia coerulea Aquca_007_00776 I 0.662
Lus10007503.g Linum usitatissimum Lus10007503.g I 0.661