ACAC_0000417401 (Angiostrongylus cantonensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 ACAC_0000417401 T232760_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PBX2
M08134_2.00 		Homo sapiens
NWGAKTGACABN
NVTGTCAMTCWN		 ChIP-seq
Mathelier et al.(2014)
MA1113.1 		0.853 0.947
PBX2
M09165_2.00 		Homo sapiens
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_HUMAN.H11MO.0.C 		0.853 0.947
Pbx2
M09199_2.00 		Mus musculus
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_MOUSE.H11MO.0.C 		0.853 0.947
pbx4
M02110_2.00 		Tetraodon nigroviridis
TTGAYGDV
BHCRTCAA		 PBM
Weirauch et al.(2014)
pTH6425 		0.853 0.930
Pbx3
M09205_2.00 		Mus musculus
BBBTGATTGRYNDN
NHNRYCAATCAVVV		 Misc
Kulakovskiy et al.(2013)
PBX3_MOUSE.H11MO.0.A 		0.853 0.930
Pbx1
M00513_2.00 		Mus musculus
NNDKANNNN
NNNNTMHNN		 PBM
Berger et al.(2008)
Pbx1_3203 		0.853 0.912
PBX1
M05362_2.00 		Homo sapiens
NTGATKGAYR
YRTCMATCAN		 SELEX
Yin et al.(2017)
PBX1_eDBD_HT-SELEX 		0.853 0.912
PBX1
M05364_2.00 		Homo sapiens
DTGMTKGRYN
NRYCMAKCAH		 SELEX
Yin et al.(2017)
PBX1_FL_HT-SELEX 		0.853 0.912
PBX1
M02685_2.00 		Homo sapiens
WWTGATTGATND
HNATCAATCAWW		 SELEX
Mathelier et al.(2014)
MA0070.1 		0.853 0.912
PBX1
M09164_2.00 		Homo sapiens
DGABTGRCRG
CYGYCAVTCH		 Misc
Kulakovskiy et al.(2013)
PBX1_HUMAN.H11MO.0.A 		0.853 0.912
PBX1
M09561_2.00 		Homo sapiens
TGABTGACAGSC
GSCTGTCAVTCA		 Misc
Heinz et al.(2010)
MCF7-PBX1_GSE28007 		0.853 0.912
PBX1
M10748_2.00 		Homo sapiens
WTKATTRDT
AHYAATMAW		 Transfac
Matys et al.(2006)
V$PBX1_01 		0.853 0.912
PBX1
M10749_2.00 		Homo sapiens
DNHTTGATTGATKDB
VHMATCAATCAADNH		 Transfac
Matys et al.(2006)
V$PBX1_02 		0.853 0.912
PBX1
M10750_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_03 		0.853 0.912
PBX1
M10751_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_05 		0.853 0.912
PBX1
M10752_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_10 		0.853 0.912
PBX1
M10753_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_Q3 		0.853 0.912
PBX1
M05363_2.00 		Homo sapiens
DTGAKKGAYG
CRTCMMTCAH		 SELEX
Yin et al.(2017)
PBX1_eDBD_Methyl-HT-SELEX 		0.853 0.912
PBX1
M05365_2.00 		Homo sapiens
MRTCAATCMH
DKGATTGAYK		 SELEX
Yin et al.(2017)
PBX1_FL_Methyl-HT-SELEX 		0.853 0.912
exd
M06487_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Mathelier et al.(2014)
MA0222.1 		0.808 0.930
exd
M06243_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Zhu et al.(2011)
Exd_Cell_FBgn0000611 		0.808 0.930
exd
M06244_2.00 		Drosophila melanogaster
NWRNWYNAAA
TTTNRWNYWN		 B1H
Zhu et al.(2011)
exd_FlyReg_FBgn0000611 		0.808 0.930
exd
M06245_2.00 		Drosophila melanogaster
NDTGAYRW
WYRTCAHN		 B1H
Zhu et al.(2011)
exd_SOLEXA_2_FBgn0000611 		0.808 0.930
exd
M06246_2.00 		Drosophila melanogaster
NNDTGAYR
YRTCAHNN		 B1H
Zhu et al.(2011)
Exd_SOLEXA_FBgn0000611 		0.808 0.930
PBX4
M00277_2.00 		Homo sapiens
NNDDWHDNNN
NNNHDWHHNN		 PBM
Barrera et al.(2016)
PBX4_REF 		0.802 0.895
PBX4
M10649_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX4_01 		0.802 0.895
CBG10835
M01243_2.00 		Caenorhabditis briggsae
NNTKAYDNN
NNHRTMANN		 PBM
Lambert et al.(2019)
pTH11444 		0.705 0.596
PBX4
M00276_2.00 		Homo sapiens
NYTAATTADNN
NNHTAATTARN		 PBM
Barrera et al.(2016)
PBX4_R215Q 		0.663 0.877
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACAC_0000417401-mRNA-1 Homeodomain 192 251

Links

Other Homeodomain family TFs
Other Angiostrongylus cantonensis TFs

435 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_00170 Capronia coronata A1O1_00170 I
A1O3_02036 Capronia epimyces A1O3_02036 I
A1O5_04108 Cladophialophora psammophila A1O5_04108 I
A1O7_00275 Cladophialophora yegresii A1O7_00275 I
ACOM029353 Anopheles coluzzii ACOM029353 I
ACRE_043870 Acremonium chrysogenum ACRE_043870 N
Afo_R012670 Aptenodytes forsteri Afo_R012670 N
AMEC000538 Anopheles melas AMEC000538 I
AOL_s00081g337 Arthrobotrys oligospora AOL_s00081g337 N
ARB_02276 Arthroderma benhamiae ARB_02276 N
Brh_R004116 Buceros rhinoceros Brh_R004116 N
CAA46605 Xenopus laevis CAA46605 N
CAA46607 Xenopus laevis CAA46607 N
CC1G_05598 Coprinopsis cinerea CC1G_05598 N
CFIO01_04514 Colletotrichum fioriniae CFIO01_04514 N
COCC4DRAFT_168040 Bipolaris maydis COCC4DRAFT_168040 I
COCCADRAFT_38231 Bipolaris zeicola COCCADRAFT_38231 I
COCMIDRAFT_87821 Bipolaris oryzae COCMIDRAFT_87821 I
COCSADRAFT_171253 Bipolaris sorokiniana COCSADRAFT_171253 I
COCVIDRAFT_34603 Bipolaris victoriae COCVIDRAFT_34603 I
csin108932 Clonorchis sinensis csin108932 I
DRE_00029 Drechslerella stenobrocha DRE_00029 N
SOX8 Equus caballus ENSECAG00000016320 I
ENSLOCG00000011834 Lepisosteus oculatus ENSLOCG00000011834 I
ENSOARG00000000906 Ovis aries ENSOARG00000000906 I
ENSP00000322568 Macaca fascicularis ENSP00000322568 I
ENSPANG00000005859 Papio anubis ENSPANG00000005859 I
ENSSTOG00000011011 Ictidomys tridecemlineatus ENSSTOG00000011011 I
e_gw.60.194.1 Branchiostoma floridae e_gw.60.194.1 N
fgenesh1_pg.C_scaffold_11000031 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000031 N
G647_00298 Cladophialophora carrionii G647_00298 I
GLOINDRAFT_323774 Rhizophagus irregularis GLOINDRAFT_323774 N
GLOINDRAFT_83691 Rhizophagus irregularis GLOINDRAFT_83691 N
GMDG_03362 Pseudogymnoascus destructans GMDG_03362 I
GPLIN_000596700 Globodera pallida GPLIN_000596700 I
GPLIN_000970900 Globodera pallida GPLIN_000970900 N
GPLIN_001405800 Globodera pallida GPLIN_001405800 I
gw.110.115.1 Branchiostoma floridae gw.110.115.1 N
GYMLUDRAFT_143012 Gymnopus luxurians GYMLUDRAFT_143012 N
H072_9933 Dactylellina haptotyla H072_9933 N
Hba_21281 Heterorhabditis bacteriophora Hba_21281 N
HMEL002398 Heliconius melpomene HMEL002398 I
HMEL006651 Heliconius melpomene HMEL006651 I
HMPREF1120_05727 Exophiala dermatitidis HMPREF1120_05727 I
HMPREF1541_07289 Cyphellophora europaea HMPREF1541_07289 N
HYDPIDRAFT_51400 Hydnomerulius pinastri HYDPIDRAFT_51400 N
L798_12049 Zootermopsis nevadensis L798_12049 I
LDEC019307 Leptinotarsa decemlineata LDEC019307 N
LEMA_P042400.1 Leptosphaeria maculans LEMA_P042400.1 I
maker-nMf.1.1.scaf00287-augustus-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf00287-augustus-gene-0.13 I
MAM_00948 Metarhizium album MAM_00948 N
MESCA006364 Megaselia scalaris MESCA006364 N
MESCA012239 Megaselia scalaris MESCA012239 I
Mycgr3G33619 Zymoseptoria tritici Mycgr3G33619 N
MYCTH_2070581 Myceliophthora thermophila MYCTH_2070581 N
Myotis_brandtii_SOX2_10019709 Myotis brandtii Myotis_brandtii_SOX2_10019709 I
Ogr08337 Ophisaurus gracilis Ogr08337 N
OIDMADRAFT_143853 Oidiodendron maius OIDMADRAFT_143853 I
PDIP_33190 Penicillium digitatum PDIP_33190 N
PEX1_064750 Penicillium expansum PEX1_064750 N
PFICI_02946 Pestalotiopsis fici PFICI_02946 N
PODANS_6_4110 Podospora anserina PODANS_6_4110 N
POSPLDRAFT_104634 Postia placenta POSPLDRAFT_104634 N
PPAI003639 Phlebotomus papatasi PPAI003639 N
PSEUBRA_SCAF2g02551 Pseudozyma brasiliensis PSEUBRA_SCAF2g02551 N
PTTG_00444 Puccinia triticina PTTG_00444 N
PV04_01817 Capronia semiimmersa PV04_01817 I
PV05_11046 Exophiala xenobiotica PV05_11046 I
PV06_03562 Exophiala oligosperma PV06_03562 I
PV07_10630 Cladophialophora immunda PV07_10630 I
PV10_01892 Exophiala mesophila PV10_01892 I
PXEA_0000763901 Protopolystoma xenopodis PXEA_0000763901 N
PXEA_0002992801 Protopolystoma xenopodis PXEA_0002992801 N
RPRC001038 Rhodnius prolixus RPRC001038 N
SAPIO_CDS2868 Scedosporium apiospermum SAPIO_CDS2868 I
SERLA73DRAFT_139986 Serpula lacrymans SERLA73DRAFT_139986 N
Sjc_0107520 Schistosoma japonicum Sjc_0107520 N
SMU15030186 Schmidtea mediterranea SMU15030186 N
SNOG_07773 Stagonospora nodorum SNOG_07773 I
SPER_0001708101 Spirometra erinaceieuropaei SPER_0001708101 N
SPER_0001952401 Spirometra erinaceieuropaei SPER_0001952401 N
T265_14506 Opisthorchis viverrini T265_14506 I
TRE_0000259001 Trichobilharzia regenti TRE_0000259001 N
TRIATDRAFT_19824 Trichoderma atroviride TRIATDRAFT_19824 N
TRV_04977 Trichophyton verrucosum TRV_04977 N
TTAC_0001064401 Hydatigera taeniaeformis TTAC_0001064401 N
UCREL1_749 Eutypa lata UCREL1_749 N
V499_06181 Pseudogymnoascus pannorum V499_06181 I
WALSEDRAFT_27096 Wallemia sebi WALSEDRAFT_27096 N
WALSEDRAFT_59420 Wallemia sebi WALSEDRAFT_59420 N
sox-2 Caenorhabditis elegans WBGene00004949 I
sox13.S Xenopus laevis XB-GENE-865496 I
sox5.S Xenopus laevis XB-GENE-865667 I
XP_002935940 Xenopus tropicalis XP_002935940 N
YQE_08562 Dendroctonus ponderosae YQE_08562 N
Z517_08752 Fonsecaea pedrosoi Z517_08752 I
Z518_08063 Rhinocladiella mackenziei Z518_08063 I
Z519_03381 Cladophialophora bantiana Z519_03381 I