nLs.2.1.2.g05836 (Litomosoides sigmodontis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 nLs.2.1.2.g05836 T235422_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HESX1
M03187_2.00 		Homo sapiens
NHTAATTRVH
DBYAATTADN		 SELEX
Jolma et al.(2013)
HESX1_1 		0.660 0.230
HESX1
M03188_2.00 		Homo sapiens
NTAATTRGYAATTAD
HTAATTRCYAATTAN		 SELEX
Jolma et al.(2013)
HESX1_2 		0.660 0.230
HESX1
M05227_2.00 		Homo sapiens
DYAATTRV
BYAATTRH		 SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX 		0.660 0.230
HESX1
M05228_2.00 		Homo sapiens
NYAATTRD
HYAATTRN		 SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX 		0.660 0.230
NOBOX
M09135_2.00 		Homo sapiens
HTAATTRVB
VBYAATTAD		 Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C 		0.650 0.361
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t05836-RA Homeodomain 146 188
nLs.2.1.2.t05836-RA Homeodomain 232 249

Links

Other Homeodomain family TFs
Other Litomosoides sigmodontis TFs

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R011917 Calypte anna Aan_R011917 I 0.691
ACUA004306 Anopheles culicifacies ACUA004306 I 0.694
ACUA026833 Anopheles culicifacies ACUA026833 I 0.636
ADAC001468 Anopheles darlingi ADAC001468 I 0.687
ADAC008104 Anopheles darlingi ADAC008104 I 0.688
AFAF008499 Anopheles farauti AFAF008499 I 0.647
Alligator_sinensis_CCG014496.1 Alligator sinensis Alligator_sinensis_CCG014496.1 I 0.634
ALUE_0000848601 Ascaris lumbricoides ALUE_0000848601 I 0.708
ALUE_0001497801 Ascaris lumbricoides ALUE_0001497801 I 0.771
AMAM000848 Anopheles maculatus AMAM000848 I 0.636
ANCCAN_10593 Ancylostoma caninum ANCCAN_10593 I 0.648
ASIM_0001230001 Anisakis simplex ASIM_0001230001 I 0.717
ASTEI06918 Anopheles stephensi ASTEI06918 N 0.663
BGIBMGA003233 Bombyx mori BGIBMGA003233 I 0.636
BGLB004491 Biomphalaria glabrata BGLB004491 I 0.695
BGLB009341 Biomphalaria glabrata BGLB009341 I 0.603
BGLB013824 Biomphalaria glabrata BGLB013824 I 0.752
Cflo_02794--XP_001120105.1_APIME Camponotus floridanus Cflo_02794--XP_001120105.1_APIME I 0.657
Cflo_04174--XP_001120833.1_APIME Camponotus floridanus Cflo_04174--XP_001120833.1_APIME I 0.666
CGI_10009720 Crassostrea gigas CGI_10009720 I 0.641
CGI_10016653 Crassostrea gigas CGI_10016653 I 0.732
CLEC007171 Cimex lectularius CLEC007171 I 0.772
Cmyd_10001740 Chelonia mydas Cmyd_10001740 I 0.722
Cmyd_10012400 Chelonia mydas Cmyd_10012400 I 0.636
D917_01051 Trichinella nativa D917_01051 I 0.706
DICVIV_02647 Dictyocaulus viviparus DICVIV_02647 I 0.679
ECANG7_01330 Echinococcus canadensis ECANG7_01330 I 0.658
EEL_0000220001 Elaeophora elaphi EEL_0000220001 I 0.623
EFV55592 Trichinella spiralis EFV55592 I 0.688
EFV57629 Trichinella spiralis EFV57629 I 0.706
ENSACAG00000002147 Anolis carolinensis ENSACAG00000002147 I 0.670
ENSAMEG00000004660 Ailuropoda melanoleuca ENSAMEG00000004660 N 0.608
ENSAMEG00000004942 Ailuropoda melanoleuca ENSAMEG00000004942 I 0.757
DLX4 Bos taurus ENSBTAG00000007353 I 0.690
DLX3 Bos taurus ENSBTAG00000017409 I 0.695
ENSBTAP00000009672-D1 Bos grunniens ENSBTAP00000009672-D1 I 0.690
NOBOX Canis familiaris ENSCAFG00000003500 I 0.632
DBX1 Callithrix jacchus ENSCJAG00000006734 I 0.644
NOBOX Callithrix jacchus ENSCJAG00000009917 I 0.670
PRRX2 Cavia porcellus ENSCPOG00000021821 I 0.674
ENSCSAG00000007090 Chlorocebus sabaeus ENSCSAG00000007090 I 0.670
ENSCSAVG00000000940 Ciona savignyi ENSCSAVG00000000940 I 0.630
Dbx1 Dipodomys ordii ENSDORG00000009286 N 0.669
NOBOX Equus caballus ENSECAG00000003123 I 0.670
DBX1 Echinops telfairi ENSETEG00000017576 N 0.649
NOBOX Felis catus ENSFCAG00000004352 I 0.670
ENSFCAG00000029037 Felis catus ENSFCAG00000029037 I 0.648
NOBOX Homo sapiens ENSG00000106410 D 0.650
HESX1 Homo sapiens ENSG00000163666 D 0.660
LHX6 Gorilla gorilla ENSGGOG00000008310 I 0.624
DBX1 Gorilla gorilla ENSGGOG00000014848 N 0.669
NOBOX Gorilla gorilla ENSGGOG00000022185 I 0.670
ENSLACG00000001487 Latimeria chalumnae ENSLACG00000001487 I 0.656
ENSMGAG00000013900 Meleagris gallopavo ENSMGAG00000013900 I 0.646
DBX1 Microcebus murinus ENSMICG00000017111 N 0.623
NOBOX Myotis lucifugus ENSMLUG00000004209 I 0.670
DLX4 Myotis lucifugus ENSMLUG00000007268 I 0.681
NOBOX Macaca mulatta ENSMMUG00000020609 I 0.670
ENSMMUP00000027138 Macaca fascicularis ENSMMUP00000027138 I 0.670
ENSMODG00000001675 Monodelphis domestica ENSMODG00000001675 I 0.636
ENSMPUG00000007079 Mustela putorius furo ENSMPUG00000007079 I 0.670
ENSNLEG00000003406 Nomascus leucogenys ENSNLEG00000003406 I 0.670
ENSNLEG00000017811 Nomascus leucogenys ENSNLEG00000017811 N 0.669
ENSOARG00000005572 Ovis aries ENSOARG00000005572 I 0.689
NOBOX Oryctolagus cuniculus ENSOCUG00000001027 I 0.686
DLX4 Oryctolagus cuniculus ENSOCUG00000022067 I 0.710
NOBOX Otolemur garnettii ENSOGAG00000010413 I 0.670
DBX1 Ochotona princeps ENSOPRG00000012954 N 0.659
ENSP00000360811-D1 Bos grunniens ENSP00000360811-D1 I 0.686
ENSP00000419457-D1 Bos grunniens ENSP00000419457-D1 I 0.670
ENSPANG00000018829 Papio anubis ENSPANG00000018829 I 0.670
DBX1 Procavia capensis ENSPCAG00000004905 N 0.646
ENSPPYG00000003422 Pongo abelii ENSPPYG00000003422 N 0.663
ENSPSIG00000014030 Pelodiscus sinensis ENSPSIG00000014030 I 0.690
DBX1 Pan troglodytes ENSPTRG00000003437 N 0.669
NOBOX Pan troglodytes ENSPTRG00000019828 I 0.650
ENSSTOG00000026570 Ictidomys tridecemlineatus ENSSTOG00000026570 I 0.656
meox1 Takifugu rubripes ENSTRUG00000005193 I 0.767
drgx Takifugu rubripes ENSTRUG00000013446 I 0.664
ENSTSYG00000000516 Tarsius syrichta ENSTSYG00000000516 I 0.651
ENSTSYG00000014450 Tarsius syrichta ENSTSYG00000014450 I 0.700
DBX1 Tursiops truncatus ENSTTRG00000000318 N 0.669
EVEC_0000357701 Enterobius vermicularis EVEC_0000357701 I 0.717
EVEC_0000536401 Enterobius vermicularis EVEC_0000536401 N 0.646
GF12207 Drosophila ananassae FBgn0089246 I 0.684
GF13343 Drosophila ananassae FBgn0090375 I 0.706
GK22877 Drosophila willistoni FBgn0224839 I 0.690
fgenesh2_pg.scaffold_23000163 Branchiostoma floridae fgenesh2_pg.scaffold_23000163 I 0.617
Gfo_R002825 Geospiza fortis Gfo_R002825 I 0.691
HCOI01026600 Haemonchus contortus HCOI01026600 I 0.606
HDID_0000333701 Hymenolepis diminuta HDID_0000333701 N 0.655
HelroG173001 Helobdella robusta HelroG173001 I 0.683
HMEL006244 Heliconius melpomene HMEL006244 I 0.691
HNAJ_0000529701 Hymenolepis nana HNAJ_0000529701 N 0.617
HPBE_0000873701 Heligmosomoides bakeri HPBE_0000873701 I 0.676
HPLM_0000971301 Haemonchus placei HPLM_0000971301 I 0.705
HPLM_0001894101 Haemonchus placei HPLM_0001894101 I 0.692
L798_06393 Zootermopsis nevadensis L798_06393 I 0.740
L798_11440 Zootermopsis nevadensis L798_11440 I 0.645
L892_g24303 Steinernema scapterisci L892_g24303 I 0.688
LDEC008146 Leptinotarsa decemlineata LDEC008146 I 0.705
MCINX007054 Melitaea cinxia MCINX007054 I 0.688
MCINX008871 Melitaea cinxia MCINX008871 I 0.688
MCOS_0000004601 Mesocestoides corti MCOS_0000004601 I 0.704
MCOS_0000655901 Mesocestoides corti MCOS_0000655901 N 0.660
Myotis_brandtii_NOBOX_10026198 Myotis brandtii Myotis_brandtii_NOBOX_10026198 I 0.670
NBR_0000705501 Nippostrongylus brasiliensis NBR_0000705501 I 0.666
NECAME_16530 Necator americanus NECAME_16530 I 0.700
nRc.2.0.1.g34428 Romanomermis culicivorax nRc.2.0.1.g34428 I 0.688
nRc.2.0.1.g35501 Romanomermis culicivorax nRc.2.0.1.g35501 I 0.676
OESDEN_01216 Oesophagostomum dentatum OESDEN_01216 I 0.624
Ogr00185 Ophisaurus gracilis Ogr00185 N 0.621
Ogr03859 Ophisaurus gracilis Ogr03859 I 0.702
Ogr09065 Ophisaurus gracilis Ogr09065 I 0.704
PEQ_0001388201 Parascaris equorum PEQ_0001388201 I 0.663
PPAI007004 Phlebotomus papatasi PPAI007004 I 0.656
Pvit_13361 Pogona vitticeps Pvit_13361 I 0.670
SINV13346 Solenopsis invicta SINV13346 I 0.699
SNAPOd2T00016706001 Oikopleura dioica SNAPOd2T00016706001 I 0.684
SPU_004366 Strongylocentrotus purpuratus SPU_004366 I 0.683
SROB_0001564301 Schistosoma rodhaini SROB_0001564301 I 0.599
SSLN_0001460801 Schistocephalus solidus SSLN_0001460801 I 0.698
SVUK_0001056001 Strongylus vulgaris SVUK_0001056001 I 0.610
T265_02852 Opisthorchis viverrini T265_02852 I 0.650
T265_14002 Opisthorchis viverrini T265_14002 I 0.704
TC000483 Tribolium castaneum TC000483 I 0.717
TCNE_0000653501 Toxocara canis TCNE_0000653501 I 0.601
TCNE_0001081001 Toxocara canis TCNE_0001081001 I 0.663
TELCIR_07728 Teladorsagia circumcincta TELCIR_07728 I 0.753
TELCIR_10796 Teladorsagia circumcincta TELCIR_10796 I 0.606
tetur02g13510 Tetranychus urticae tetur02g13510 I 0.656
tetur14g02510 Tetranychus urticae tetur14g02510 I 0.684
TTAC_0000027101 Hydatigera taeniaeformis TTAC_0000027101 I 0.678
TTAC_0000701101 Hydatigera taeniaeformis TTAC_0000701101 N 0.660
TTAC_0001021101 Hydatigera taeniaeformis TTAC_0001021101 N 0.619
TTRE_0000072001 Trichuris trichiura TTRE_0000072001 I 0.693
YQE_10100 Dendroctonus ponderosae YQE_10100 I 0.715