ALUE_0000801801 (Ascaris lumbricoides)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 ALUE_0000801801 T243648_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
hsf-1
M00682_2.00 		Caenorhabditis elegans
TTCYAGAA
TTCTRGAA		 PBM
Narasimhan et al.(2015)
pTH10796 		0.523 0.750
HSF4
M03325_2.00 		Homo sapiens
GAANNTTCBVGAA
TTCBVGAANNTTC		 SELEX
Jolma et al.(2013)
HSF4_1 		0.341 0.531
HSF4
M05509_2.00 		Homo sapiens
VGAABVTTCKVGAAN
NTTCBMGAABVTTCB		 SELEX
Yin et al.(2017)
HSF4_eDBD_HT-SELEX 		0.341 0.531
HSF4
M10862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF4_Q3 		0.341 0.531
HSF4
M05510_2.00 		Homo sapiens
RGAABVWDCYRGAWN
NWTCYRGHWBVTTCY		 SELEX
Yin et al.(2017)
HSF4_eDBD_Methyl-HT-SELEX 		0.341 0.531
HSF1
M03329_2.00 		Homo sapiens
GAANVTTCBVGAA
TTCBVGAABNTTC		 SELEX
Jolma et al.(2013)
HSF1_1 		0.330 0.542
HSF1
M03330_2.00 		Homo sapiens
GAANRTTCBAGAA
TTCTVGAAYNTTC		 SELEX
Jolma et al.(2013)
HSF1_2 		0.330 0.542
HSF1
M05523_2.00 		Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB		 SELEX
Yin et al.(2017)
HSF1_eDBD_HT-SELEX 		0.330 0.542
HSF1
M05525_2.00 		Homo sapiens
VGAANRTTCKVGAAN
NTTCBMGAAYNTTCB		 SELEX
Yin et al.(2017)
HSF1_FL_HT-SELEX 		0.330 0.542
HSF1
M07977_2.00 		Homo sapiens
GDCSYGGGTTCRADYCCC
GGGRHTYGAACCCRSGHC		 ChIP-seq
Gerstein et al.(2012)
HepG2_HSF1_Stanford 		0.330 0.542
HSF1
M09230_2.00 		Homo sapiens
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN		 Misc
Kulakovskiy et al.(2013)
HSF1_HUMAN.H11MO.0.A 		0.330 0.542
Hsf1
M09232_2.00 		Mus musculus
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN		 Misc
Kulakovskiy et al.(2013)
HSF1_MOUSE.H11MO.0.A 		0.330 0.542
HSF1
M09592_2.00 		Homo sapiens
NNBBCYRGAANNTTCYRGVV
BBCYRGAANNTTCYRGVVNN		 Misc
Heinz et al.(2010)
HepG2-HSF1_GSE31477 		0.330 0.542
Hsf1
M09593_2.00 		Mus musculus
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN		 Misc
Heinz et al.(2010)
Striatum-HSF1_GSE38000 		0.330 0.542
HSF1
M10863_2.00 		Homo sapiens
NGAAHNTTCY
RGAANDTTCN		 Transfac
Matys et al.(2006)
V$HSF1_01 		0.330 0.542
HSF1
M10864_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q5_01 		0.330 0.542
HSF1
M10865_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q5 		0.330 0.542
HSF1
M10866_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q6_01 		0.330 0.542
HSF1
M10867_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q6 		0.330 0.542
HSF1
M10868_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF_Q6 		0.330 0.542
HSF1
M05524_2.00 		Homo sapiens
RGAANRTTCYRGAWN
NWTCYRGAAYNTTCY		 SELEX
Yin et al.(2017)
HSF1_eDBD_Methyl-HT-SELEX 		0.330 0.542
HSF1
M05526_2.00 		Homo sapiens
RGAANVTTCYRGAWN
NWTCYRGAABNTTCY		 SELEX
Yin et al.(2017)
HSF1_FL_Methyl-HT-SELEX 		0.330 0.542
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ALUE_0000801801-mRNA-1 HSF 35 138

Links

Other HSF family TFs
Other Ascaris lumbricoides TFs

351 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30072.m000986 Ricinus communis 30072.m000986 N
Aquca_027_00267 Aquilegia coerulea Aquca_027_00267 N
MYB3 Arabidopsis thaliana AT1G22640 D
ATMYBL2 Arabidopsis thaliana AT1G71030 N
MYB15 Arabidopsis thaliana AT3G23250 D
ATMYB48 Arabidopsis thaliana AT3G46130 I
WER Arabidopsis thaliana AT5G14750 D
MYB59 Arabidopsis thaliana AT5G59780 D
BGIOSGA002691 Oryza indica BGIOSGA002691 N
Bo2g070770 Brassica oleracea Bo2g070770 N
Bo6g112670 Brassica oleracea Bo6g112670 N
Bostr.10273s0244 Boechera stricta Bostr.10273s0244 N
Bostr.18473s0331 Boechera stricta Bostr.18473s0331 I
Bra007957 Brassica rapa Bra007957 N
BRADI4G04050 Brachypodium distachyon BRADI4G04050 I
BRADI4G09490 Brachypodium distachyon BRADI4G09490 N
Cagra.10637s0001 Capsella grandiflora Cagra.10637s0001 I
Carubv10027237m.g Capsella rubella Carubv10027237m.g N
cassava13590.valid.m1 Manihot esculenta cassava13590.valid.m1 N
cassava29437.valid.m1 Manihot esculenta cassava29437.valid.m1 N
Ca_11427 Cicer arietinum Ca_11427 N
Ca_16710 Cicer arietinum Ca_16710 N
Cucsa.213500 Cucumis sativus Cucsa.213500 I
Eucgr.B02401 Eucalyptus grandis Eucgr.B02401 N
ATMYBL2 Arabidopsis lyrata fgenesh2_kg.2__1365__AT1G71030.1 N
GLYMA03G41965 Glycine max GLYMA03G41965 N
GLYMA13G40830 Glycine max GLYMA13G40830 I
GLYMA15G04620 Glycine max GLYMA15G04620 I
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I
Gorai.011G122800 Gossypium raimondii Gorai.011G122800 I
Gorai.013G265300 Gossypium raimondii Gorai.013G265300 I
GRMZM2G130149 Zea mays GRMZM2G130149 I
LjT39N06.160.nd Lotus japonicus LjT39N06.160.nd N
Lus10040861.g Linum usitatissimum Lus10040861.g N
mgf018170m Mimulus guttatus mgf018170m N
MLOC_52439 Hordeum vulgare MLOC_52439 I
MLOC_78504 Hordeum vulgare MLOC_78504 I
MTR_4g063100 Medicago truncatula MTR_4g063100 I
OBART01G01770 Oryza barthii OBART01G01770 N
OBART01G27550 Oryza barthii OBART01G27550 N
OGLUM01G01950 Oryza glumaepatula OGLUM01G01950 N
OMERI01G01270 Oryza meridionalis OMERI01G01270 N
ONIVA01G01950 Oryza nivara ONIVA01G01950 N
OPUNC01G01540 Oryza punctata OPUNC01G01540 N
orange1.1g031483m.g Citrus sinensis orange1.1g031483m.g N
OS01G0127450 Oryza sativa OS01G0127450 N
Pavir.Ca02588 Panicum virgatum Pavir.Ca02588 I
Pavir.Hb00058 Panicum virgatum Pavir.Hb00058 I
Pavir.J08441 Panicum virgatum Pavir.J08441 I
Pavir.J11500 Panicum virgatum Pavir.J11500 I
Pavir.J33560 Panicum virgatum Pavir.J33560 I
PGSC0003DMG400015536 Solanum tuberosum PGSC0003DMG400015536 I
PGSC0003DMG400030397 Solanum tuberosum PGSC0003DMG400030397 N
PGSC0003DMG401010883 Solanum tuberosum PGSC0003DMG401010883 N
PK07876.1 Cannabis sativa PK07876.1 N
PK18646.1 Cannabis sativa PK18646.1 N
PK22178.1 Cannabis sativa PK22178.1 N
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I
SapurV1A.2099s0020 Salix purpurea SapurV1A.2099s0020 N
SapurV1A.2154s0020 Salix purpurea SapurV1A.2154s0020 N
Sb05g027370 Sorghum bicolor Sb05g027370 N
Sb08g018580 Sorghum bicolor Sb08g018580 I
Si023104m.g Setaria italica Si023104m.g I
Si026803m.g Setaria italica Si026803m.g I
Solyc06g005310.2 Solanum lycopersicum Solyc06g005310.2 N
Solyc06g075660.2 Solanum lycopersicum Solyc06g075660.2 N
Thhalv10002648m.g Eutrema salsugineum Thhalv10002648m.g I
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I
Thhalv10019036m.g Eutrema salsugineum Thhalv10019036m.g N
Thhalv10022197m.g Eutrema salsugineum Thhalv10022197m.g N
Traes_1BS_060C24872 Triticum aestivum Traes_1BS_060C24872 N
Traes_2AL_E2F8D46CE Triticum aestivum Traes_2AL_E2F8D46CE N
Traes_2DL_77F235694 Triticum aestivum Traes_2DL_77F235694 N
Traes_6BL_931C25F08 Triticum aestivum Traes_6BL_931C25F08 N
TRIUR3_12584 Triticum urartu TRIUR3_12584 N