IRF3 (Otolemur garnettii)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSOGAG00000011935 T244264_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF3
M03331_2.00 		Homo sapiens
NNRRAANGGAAACCGAAACYR
YRGTTTCGGTTTCCNTTYYNN		 SELEX
Jolma et al.(2013)
IRF3_1 		0.810 0.810
IRF3
M05531_2.00 		Homo sapiens
DCVGTTTCSNSGAAACCGMAASN
NSTTKCGGTTTCSNSGAAACBGH		 SELEX
Yin et al.(2017)
IRF3_eDBD_HT-SELEX 		0.810 0.810
IRF3
M05533_2.00 		Homo sapiens
HSGAAAVBGAAACYGAAACN
NGTTTCRGTTTCVBTTTCSD		 SELEX
Yin et al.(2017)
IRF3_FL_HT-SELEX 		0.810 0.810
IRF3
M09234_2.00 		Homo sapiens
RRRARDGAAAVDGRAASNRA
TYNSTTYCHBTTTCHYTYYY		 Misc
Kulakovskiy et al.(2013)
IRF3_HUMAN.H11MO.0.B 		0.810 0.810
IRF3
M10883_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF3_Q3 		0.810 0.810
IRF3
M05532_2.00 		Homo sapiens
KCDSTTTCCHGGAAAMNRAWAV
BTWTYNKTTTCCDGGAAASHGM		 SELEX
Yin et al.(2017)
IRF3_eDBD_Methyl-HT-SELEX 		0.810 0.810
IRF3
M05534_2.00 		Homo sapiens
HGGAAABBGAAASBGAAASN
NSTTTCVSTTTCVVTTTCCD		 SELEX
Yin et al.(2017)
IRF3_FL_Methyl-HT-SELEX 		0.810 0.810
Irf3
M00174_2.00 		Mus musculus
RDWNBGMAAS
STTKCVNWHY		 PBM
Badis et al.(2009)
Irf3_3985 		0.781 0.781
Irf3
M09241_2.00 		Mus musculus
RRRARDGAAAVDGRAASNRA
TYNSTTYCHBTTTCHYTYYY		 Misc
Kulakovskiy et al.(2013)
IRF3_MOUSE.H11MO.0.A 		0.781 0.781
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000010680 IRF 7 111

Links

Other IRF family TFs
Other Otolemur garnettii TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG010485.1 Alligator sinensis Alligator_sinensis_CCG010485.1 I
Cmyd_10006231 Chelonia mydas Cmyd_10006231 I
ENSAMEG00000001482 Ailuropoda melanoleuca ENSAMEG00000001482 I
ENSAMXG00000004952 Astyanax mexicanus ENSAMXG00000004952 I
PRDM1 Canis familiaris ENSCAFG00000003694 I
PRDM1 Callithrix jacchus ENSCJAG00000006332 I
PRDM1 Cavia porcellus ENSCPOG00000014064 I
ENSCSAG00000014744 Chlorocebus sabaeus ENSCSAG00000014744 I
PRDM1 Equus caballus ENSECAG00000009044 I
PRDM1 Erinaceus europaeus ENSEEUG00000013222 I
PRDM1 Echinops telfairi ENSETEG00000019669 I
PRDM1 Felis catus ENSFCAG00000010755 I
PRDM1 Homo sapiens ENSG00000057657 D
PRDM1 Gorilla gorilla ENSGGOG00000001929 I
PRDM1 Loxodonta africana ENSLAFG00000013436 I
ENSMEUG00000000043 Macropus eugenii ENSMEUG00000000043 I
PRDM1 Microcebus murinus ENSMICG00000010329 I
PRDM1 Myotis lucifugus ENSMLUG00000014085 I
PRDM1 Macaca mulatta ENSMMUG00000021401 I
PRDM1 Monodelphis domestica ENSMODG00000018029 I
ENSMPUG00000009522 Mustela putorius furo ENSMPUG00000009522 I
Prdm1 Mus musculus ENSMUSG00000038151 D
ENSNLEG00000013211 Nomascus leucogenys ENSNLEG00000013211 I
PRDM1 Ornithorhynchus anatinus ENSOANG00000004176 I
PRDM1 Oryctolagus cuniculus ENSOCUG00000015495 I
PRDM1 Otolemur garnettii ENSOGAG00000014036 I
PRDM1 Ochotona princeps ENSOPRG00000006055 I
ENSP00000358092 Macaca fascicularis ENSP00000358092 I
ENSPANG00000016727 Papio anubis ENSPANG00000016727 I
ENSPPYG00000016879 Pongo abelii ENSPPYG00000016879 I
ENSPSIG00000002661 Pelodiscus sinensis ENSPSIG00000002661 I
PRDM1 Pan troglodytes ENSPTRG00000018457 I
Prdm1 Rattus norvegicus ENSRNOG00000000323 I
PRDM1 Sorex araneus ENSSARG00000004079 I
ENSSHAG00000010080 Sarcophilus harrisii ENSSHAG00000010080 I
PRDM1 Sus scrofa ENSSSCG00000004369 I
ENSSTOG00000016505 Ictidomys tridecemlineatus ENSSTOG00000016505 I
PRDM1 Tupaia belangeri ENSTBEG00000004089 I
ENSTNIG00000012300 Tetraodon nigroviridis ENSTNIG00000012300 I
ENSTSYG00000011666 Tarsius syrichta ENSTSYG00000011666 I
PRDM1 Tursiops truncatus ENSTTRG00000012894 I
Myotis_brandtii_PRDM1_10034696 Myotis brandtii Myotis_brandtii_PRDM1_10034696 I