LPERR04G08300 (Leersia perrieri)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 LPERR04G08300 T249356_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.867 0.611
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.867 0.611
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.867 0.611
PK04914.1
M01262_2.00 		Cannabis sativa
DCCGTYAN
NTRACGGH		 PBM
Lambert et al.(2019)
pTH10098 		0.822 0.569
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR04G08300.1 MADF 150 230

Links

Other MADF family TFs
Other Leersia perrieri TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28077.m000081 Ricinus communis 28077.m000081 I 0.882
29815.m000504 Ricinus communis 29815.m000504 I 0.851
AMTR_s00006p00265300 Amborella trichopoda AMTR_s00006p00265300 I 0.843
Aquca_009_01006 Aquilegia coerulea Aquca_009_01006 I 0.895
Aquca_019_00072 Aquilegia coerulea Aquca_019_00072 I 0.893
AT3G10030 Arabidopsis thaliana AT3G10030 D 0.867
BGIOSGA016339 Oryza indica BGIOSGA016339 I 0.965
Bo5g137800 Brassica oleracea Bo5g137800 I 0.897
Bostr.22252s0062 Boechera stricta Bostr.22252s0062 I 0.867
Bra029812 Brassica rapa Bra029812 I 0.897
BRADI5G08980 Brachypodium distachyon BRADI5G08980 I 0.947
Cagra.4686s0014 Capsella grandiflora Cagra.4686s0014 I 0.867
Carubv10015256m.g Capsella rubella Carubv10015256m.g I 0.867
cassava30771.valid.m1 Manihot esculenta cassava30771.valid.m1 I 0.864
Ca_20148 Cicer arietinum Ca_20148 I 0.826
Ciclev10011433m.g Citrus clementina Ciclev10011433m.g I 0.864
Cla018015 Citrullus lanatus Cla018015 I 0.874
Cucsa.378670 Cucumis sativus Cucsa.378670 I 0.874
Eucgr.A01571 Eucalyptus grandis Eucgr.A01571 I 0.826
evm.TU.supercontig_128.55 Carica papaya evm.TU.supercontig_128.55 I 0.897
F775_31501 Aegilops tauschii F775_31501 I 0.953
fgenesh1_pm.C_scaffold_3000820 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000820 I 0.867
gene30101-v1.0-hybrid Fragaria vesca gene30101-v1.0-hybrid I 0.882
GLYMA10G07490 Glycine max GLYMA10G07490 I 0.852
GLYMA10G34520 Glycine max GLYMA10G34520 I 0.883
GLYMA13G21371 Glycine max GLYMA13G21371 I 0.852
Gorai.007G371500 Gossypium raimondii Gorai.007G371500 I 0.847
GRMZM2G002978 Zea mays GRMZM2G002978 I 0.923
GSMUA_Achr2G20220_001 Musa acuminata GSMUA_Achr2G20220_001 I 0.932
GSMUA_Achr6G13420_001 Musa acuminata GSMUA_Achr6G13420_001 I 0.920
MDP0000201016 Malus domestica MDP0000201016 I 0.868
MDP0000399495 Malus domestica MDP0000399495 I 0.868
MDP0000415733 Malus domestica MDP0000415733 I 0.868
mgf008067m Mimulus guttatus mgf008067m I 0.886
MLOC_28975 Hordeum vulgare MLOC_28975 I 0.938
MTR_1g061600 Medicago truncatula MTR_1g061600 I 0.826
OB04G18670 Oryza brachyantha OB04G18670 I 0.957
OGLUM04G11230 Oryza glumaepatula OGLUM04G11230 I 0.953
OMERI04G10080 Oryza meridionalis OMERI04G10080 I 0.960
ONIVA04G09510 Oryza nivara ONIVA04G09510 I 0.965
OPUNC04G09570 Oryza punctata OPUNC04G09570 I 0.965
Pavir.Gb01778 Panicum virgatum Pavir.Gb01778 I 0.942
Pavir.J13370 Panicum virgatum Pavir.J13370 I 0.926
PGSC0003DMG400002727 Solanum tuberosum PGSC0003DMG400002727 I 0.852
PK04914.1 Cannabis sativa PK04914.1 D 0.822
Pm026265 Prunus mume Pm026265 I 0.852
POPTR_0006s11850 Populus trichocarpa POPTR_0006s11850 I 0.908
POPTR_0008s02730 Populus trichocarpa POPTR_0008s02730 I 0.900
POPTR_0010s23970 Populus trichocarpa POPTR_0010s23970 I 0.900
PRUPE_ppa004154mg Prunus persica PRUPE_ppa004154mg I 0.852
PRUPE_ppa022998mg Prunus persica PRUPE_ppa022998mg I 0.878
SapurV1A.0226s0070 Salix purpurea SapurV1A.0226s0070 I 0.888
SapurV1A.0243s0300 Salix purpurea SapurV1A.0243s0300 I 0.900
SapurV1A.0439s0120 Salix purpurea SapurV1A.0439s0120 I 0.900
Sb06g015280 Sorghum bicolor Sb06g015280 I 0.922
Si009787m.g Setaria italica Si009787m.g I 0.924
Solyc09g008850.2 Solanum lycopersicum Solyc09g008850.2 I 0.838
TCM_022397 Theobroma cacao TCM_022397 I 0.869
TCM_043551 Theobroma cacao TCM_043551 I 0.849
Thhalv10020471m.g Eutrema salsugineum Thhalv10020471m.g I 0.867
Traes_2AL_246006E77 Triticum aestivum Traes_2AL_246006E77 I 0.948
Traes_2BL_83EDE2CBB Triticum aestivum Traes_2BL_83EDE2CBB I 0.948
TRIUR3_22240 Triticum urartu TRIUR3_22240 I 0.953
VIT_08s0007g04160 Vitis vinifera VIT_08s0007g04160 I 0.840
VIT_13s0074g00240 Vitis vinifera VIT_13s0074g00240 I 0.878