PRUPE_ppa009404mg (Prunus persica)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 PRUPE_ppa009404mg T249712_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GT-1
M02274_2.00 		Arabidopsis lyrata
GGTTAACC
GGTTAACC		 PBM
Weirauch et al.(2014)
pTH9235 		0.960 0.754
MTR_3g085960
M02270_2.00 		Medicago truncatula
NWAACYNNNN
NNNNRGTTWN		 PBM
Weirauch et al.(2014)
pTH9208 		0.960 0.692
MDP0000164819
M02280_2.00 		Malus domestica
YTAACYVNNN
NNNBRGTTAR		 PBM
Weirauch et al.(2014)
pTH9204 		0.956 0.646
GT-1
M02263_2.00 		Arabidopsis thaliana
KTTAACCM
KGGTTAAM		 PBM
Weirauch et al.(2014)
pTH8149 		0.956 0.738
GT-1
M10896_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GT1_Q6_02 		0.956 0.738
GT-1
M10897_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GT1_Q6 		0.956 0.738
OS04G0486400
M02273_2.00 		Oryza sativa
YTAACYNNNN
NNNNRGTTAR		 PBM
Weirauch et al.(2014)
pTH9338 		0.946 0.646
GT-4
M02265_2.00 		Arabidopsis thaliana
NHDACHNNNN
NNNNDGTHDN		 PBM
Weirauch et al.(2014)
pTH7910 		0.943 0.554
GT-4
M06974_2.00 		Arabidopsis thaliana
AACCATGGTTAADWYWWWWHH
DDWWWWRWHTTAACCATGGTT		 Dap-seq
OMalley et al.(2016)
AT3G25990_col_a 		0.943 0.554
GT-4
M06975_2.00 		Arabidopsis thaliana
WWMNYTAACYVWRRTTADNH
DNHTAAYYWBRGTTARNKWW		 Dap-seq
OMalley et al.(2016)
AT3G25990_colamp_a 		0.943 0.554
GLYMA11G37390
M02269_2.00 		Glycine max
BWDACYNNNN
NNNNRGTHWV		 PBM
Weirauch et al.(2014)
pTH9183 		0.938 0.631
PK20543.1
M01264_2.00 		Cannabis sativa
YTAACYNNNN
NNNNRGTTAR		 PBM
Lambert et al.(2019)
pTH11253 		0.933 0.677
cassava13991.valid.m1
M02279_2.00 		Manihot esculenta
NNDACHNNNN
NNNNDGTHNN		 PBM
Weirauch et al.(2014)
pTH9206 		0.933 0.631
fgenesh2_kg.5__353__AT3G25990.1
M02268_2.00 		Arabidopsis lyrata
NNNHAACCCCYNN
NNRGGGGTTDNNN		 PBM
Weirauch et al.(2014)
pTH9228 		0.929 0.585
29929.m004704
M02278_2.00 		Ricinus communis
NDNDHDHNHN
NDNDHDHNHN		 PBM
Weirauch et al.(2014)
pTH9339 		0.895 0.569
VIT_17s0000g10420
M02275_2.00 		Vitis vinifera
GTTAACYV
BRGTTAAC		 PBM
Weirauch et al.(2014)
pTH9293 		0.868 0.538
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ24049 MADF 2 71

Links

Other MADF family TFs
Other Prunus persica TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_002_00170 Aquilegia coerulea Aquca_002_00170 I
Aquca_025_00333 Aquilegia coerulea Aquca_025_00333 I
GL1 Arabidopsis thaliana AT3G27920 I
WER Arabidopsis thaliana AT5G14750 D
MYB23 Arabidopsis thaliana AT5G40330 D
Bo2g012170 Brassica oleracea Bo2g012170 I
Bo9g165670 Brassica oleracea Bo9g165670 I
Bostr.1460s0063 Boechera stricta Bostr.1460s0063 I
Bostr.2902s0211 Boechera stricta Bostr.2902s0211 I
Bostr.7200s0005 Boechera stricta Bostr.7200s0005 I
Bra008740 Brassica rapa Bra008740 I
Bra025311 Brassica rapa Bra025311 I
Bra025589 Brassica rapa Bra025589 I
Cagra.3160s0003 Capsella grandiflora Cagra.3160s0003 I
Cagra.3166s0078 Capsella grandiflora Cagra.3166s0078 I
Cagra.4961s0006 Capsella grandiflora Cagra.4961s0006 I
Carubv10001990m.g Capsella rubella Carubv10001990m.g I
Carubv10005698m.g Capsella rubella Carubv10005698m.g I
Carubv10018791m.g Capsella rubella Carubv10018791m.g I
cassava26193.m1 Manihot esculenta cassava26193.m1 I
cassava27350.m1 Manihot esculenta cassava27350.m1 I
Ciclev10032713m.g Citrus clementina Ciclev10032713m.g I
Cla011528 Citrullus lanatus Cla011528 I
Eucgr.B00373 Eucalyptus grandis Eucgr.B00373 I
Eucgr.B03324 Eucalyptus grandis Eucgr.B03324 N
Eucgr.I01791 Eucalyptus grandis Eucgr.I01791 I
Eucgr.J02212 Eucalyptus grandis Eucgr.J02212 I
evm.TU.supercontig_124.57 Carica papaya evm.TU.supercontig_124.57 I
GL1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5000559 I
WER Arabidopsis lyrata fgenesh2_kg.6__1454__AT5G14750.1 I
gene32181-v1.0-hybrid Fragaria vesca gene32181-v1.0-hybrid I
Gorai.007G001800 Gossypium raimondii Gorai.007G001800 I
GSMUA_Achr10G19970_001 Musa acuminata GSMUA_Achr10G19970_001 I
MDP0000164048 Malus domestica MDP0000164048 I
MDP0000537324 Malus domestica MDP0000537324 I
MDP0000578193 Malus domestica MDP0000578193 I
MDP0000650225 Malus domestica MDP0000650225 I
orange1.1g047269m.g Citrus sinensis orange1.1g047269m.g I
Pm006678 Prunus mume Pm006678 I
Pm024725 Prunus mume Pm024725 I
POPTR_0012s08190 Populus trichocarpa POPTR_0012s08190 I
PRUPE_ppa010908mg Prunus persica PRUPE_ppa010908mg I
PRUPE_ppa014884mg Prunus persica PRUPE_ppa014884mg I
SapurV1A.1178s0050 Salix purpurea SapurV1A.1178s0050 I
TCM_010360 Theobroma cacao TCM_010360 I
TCM_012057 Theobroma cacao TCM_012057 I
TCM_016886 Theobroma cacao TCM_016886 I
Thhalv10005428m.g Eutrema salsugineum Thhalv10005428m.g I
Thhalv10014715m.g Eutrema salsugineum Thhalv10014715m.g I
Thhalv10028340m.g Eutrema salsugineum Thhalv10028340m.g I
VIT_01s0127g00730 Vitis vinifera VIT_01s0127g00730 I
VIT_14s0066g01220 Vitis vinifera VIT_14s0066g01220 I
VIT_17s0000g08480 Vitis vinifera VIT_17s0000g08480 I