Ciclev10016016m.g (Citrus clementina)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Ciclev10016016m.g T250644_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G58630
M06976_2.00 		Arabidopsis thaliana
HNTCGCCGGARWHDN
NHDWYTCCGGCGAND		 Dap-seq
OMalley et al.(2016)
AT3G58630_col_a 		0.877 0.653
AT3G58630
M06977_2.00 		Arabidopsis thaliana
NNTCGCCGGARWHDN
NHDWYTCCGGCGANN		 Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a 		0.877 0.653
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10016016m MADF 45 125

Links

Other MADF family TFs
Other Citrus clementina TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R004747 Calypte anna Aan_R004747 I 0.000
Afo_R014150 Aptenodytes forsteri Afo_R014150 I 0.000
Alligator_sinensis_CCG017359.1 Alligator sinensis Alligator_sinensis_CCG017359.1 I 0.000
Brh_R002803 Buceros rhinoceros Brh_R002803 I 0.000
Cmyd_10021519 Chelonia mydas Cmyd_10021519 I 0.000
HDX Anolis carolinensis ENSACAG00000014116 I 0.000
ENSAPLG00000007946 Anas platyrhynchos ENSAPLG00000007946 I 0.000
HDX Canis familiaris ENSCAFG00000017380 I 0.000
HDX Callithrix jacchus ENSCJAG00000008295 I 0.000
HDX Cavia porcellus ENSCPOG00000014501 I 0.000
ENSCSAG00000010546 Chlorocebus sabaeus ENSCSAG00000010546 I 0.000
hdx Danio rerio ENSDARG00000079382 I 0.000
HDX Equus caballus ENSECAG00000024862 I 0.000
HDX Erinaceus europaeus ENSEEUG00000011626 I 0.000
HDX Echinops telfairi ENSETEG00000018031 I 0.000
ENSFALG00000004050 Ficedula albicollis ENSFALG00000004050 I 0.000
HDX Felis catus ENSFCAG00000005781 I 0.000
HDX Homo sapiens ENSG00000165259 D 0.000
hdx Gasterosteus aculeatus ENSGACG00000018543 I 0.000
HDX Gallus gallus ENSGALG00000007041 I 0.000
HDX Gorilla gorilla ENSGGOG00000005551 I 0.000
ENSGMOG00000004501 Gadus morhua ENSGMOG00000004501 I 0.000
ENSLACG00000001553 Latimeria chalumnae ENSLACG00000001553 I 0.000
HDX Loxodonta africana ENSLAFG00000028655 I 0.000
ENSLOCG00000015046 Lepisosteus oculatus ENSLOCG00000015046 I 0.000
ENSMEUG00000003811 Macropus eugenii ENSMEUG00000003811 I 0.000
HDX Meleagris gallopavo ENSMGAG00000004732 I 0.000
HDX Macaca mulatta ENSMMUG00000020536 I 0.000
HDX Monodelphis domestica ENSMODG00000014307 I 0.000
ENSMPUG00000006315 Mustela putorius furo ENSMPUG00000006315 I 0.000
Hdx Mus musculus ENSMUSG00000034551 D 0.000
ENSNLEG00000002624 Nomascus leucogenys ENSNLEG00000002624 I 0.000
ENSOARG00000001832 Ovis aries ENSOARG00000001832 I 0.000
HDX Otolemur garnettii ENSOGAG00000031446 I 0.000
ENSONIG00000017662 Oreochromis niloticus ENSONIG00000017662 I 0.000
hdx Oryzias latipes ENSORLG00000008466 I 0.000
ENSP00000297977 Macaca fascicularis ENSP00000297977 I 0.000
ENSPANG00000014327 Papio anubis ENSPANG00000014327 I 0.000
ENSPFOG00000004291 Poecilia formosa ENSPFOG00000004291 I 0.000
ENSPMAG00000004328 Petromyzon marinus ENSPMAG00000004328 I 0.000
ENSPPYG00000020514 Pongo abelii ENSPPYG00000020514 I 0.000
ENSPSIG00000003320 Pelodiscus sinensis ENSPSIG00000003320 I 0.000
HDX Pan troglodytes ENSPTRG00000022065 I 0.000
HDX Pteropus vampyrus ENSPVAG00000015095 I 0.000
Hdx Rattus norvegicus ENSRNOG00000037799 I 0.000
HDX Sorex araneus ENSSARG00000009351 I 0.000
ENSSHAG00000014376 Sarcophilus harrisii ENSSHAG00000014376 I 0.000
HDX Taeniopygia guttata ENSTGUG00000002499 I 0.000
rps6kal Tetraodon nigroviridis ENSTNIG00000015774 I 0.000
hdx Takifugu rubripes ENSTRUG00000008150 I 0.000
ENSTSYG00000009619 Tarsius syrichta ENSTSYG00000009619 I 0.000
HDX Tursiops truncatus ENSTTRG00000000100 I 0.000
HDX Vicugna pacos ENSVPAG00000003255 I 0.000
ENSXMAG00000011901 Xiphophorus maculatus ENSXMAG00000011901 I 0.000
Gfo_R008526 Geospiza fortis Gfo_R008526 I 0.000
Myotis_brandtii_HDX_10020373 Myotis brandtii Myotis_brandtii_HDX_10020373 I 0.000
Ogr06876 Ophisaurus gracilis Ogr06876 I 0.000
Pvit_02951 Pogona vitticeps Pvit_02951 I 0.000
hdx Xenopus tropicalis XB-GENE-853748 I 0.000