OBART06G13310 (Oryza barthii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 OBART06G13310 T254988_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART06G13310.1 MADS box 10 57

Links

Other MADS box family TFs
Other Oryza barthii TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA022830 Oryza indica BGIOSGA022830 N 0.979
F775_04223 Aegilops tauschii F775_04223 I 0.708
F775_43210 Aegilops tauschii F775_43210 I 0.708
GRMZM2G459864 Zea mays GRMZM2G459864 N 0.729
GSMUA_Achr5G26530_001 Musa acuminata GSMUA_Achr5G26530_001 I 0.729
GSMUA_Achr8G07230_001 Musa acuminata GSMUA_Achr8G07230_001 I 0.708
LPERR06G13350 Leersia perrieri LPERR06G13350 N 0.875
LPERR11G15320 Leersia perrieri LPERR11G15320 N 0.792
OB06G21580 Oryza brachyantha OB06G21580 N 0.812
OBART02G04930 Oryza barthii OBART02G04930 N 0.724
OGLUM06G14250 Oryza glumaepatula OGLUM06G14250 N 0.958
OLONG_015132 Oryza longistaminata OLONG_015132 N 0.979
ONIVA06G15960 Oryza nivara ONIVA06G15960 N 0.979
OPUNC06G12720 Oryza punctata OPUNC06G12720 N 0.875
ORGLA06G0273400 Oryza glaberrima ORGLA06G0273400 N 0.979
ORUFI06G14240 Oryza rufipogon ORUFI06G14240 N 0.979
Sb07g007306 Sorghum bicolor Sb07g007306 N 0.750
Sb07g007373 Sorghum bicolor Sb07g007373 N 0.750
Sb0836s002010 Sorghum bicolor Sb0836s002010 N 0.708
TRAES3BF106100060CFD_g Triticum aestivum TRAES3BF106100060CFD_g I 0.708
Traes_6DL_609A01BD5 Triticum aestivum Traes_6DL_609A01BD5 I 0.708