evm.TU.contig_33038 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_33038 T258070_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_33038.1 MADS box 15 62
evm.TU.contig_33038.2 MADS box 15 62

Links

Other MADS box family TFs
Other Carica papaya TFs

290 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC198403.3_FG001 Zea mays AC198403.3_FG001 I 0.000
AMTR_s00099p00039760 Amborella trichopoda AMTR_s00099p00039760 I 0.000
ERF022 Arabidopsis thaliana AT1G33760 I 0.000
BGIOSGA006249 Oryza indica BGIOSGA006249 N 0.000
BGIOSGA034227 Oryza indica BGIOSGA034227 I 0.000
Bo8g027240 Brassica oleracea Bo8g027240 I 0.000
Bostr.3359s0006 Boechera stricta Bostr.3359s0006 I 0.000
Bra028009 Brassica rapa Bra028009 I 0.000
BRADI3G45997 Brachypodium distachyon BRADI3G45997 N 0.000
BRADI4G21265 Brachypodium distachyon BRADI4G21265 I 0.000
Carubv10011715m.g Capsella rubella Carubv10011715m.g I 0.000
Carubv10012215m.g Capsella rubella Carubv10012215m.g I 0.000
chr2.CM0018.470.nd Lotus japonicus chr2.CM0018.470.nd I 0.000
Ciclev10023857m.g Citrus clementina Ciclev10023857m.g I 0.000
Ciclev10024063m.g Citrus clementina Ciclev10024063m.g I 0.000
Eucgr.F02974 Eucalyptus grandis Eucgr.F02974 I 0.000
Eucgr.F02976 Eucalyptus grandis Eucgr.F02976 I 0.000
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I 0.000
F775_17299 Aegilops tauschii F775_17299 I 0.000
GLYMA01G44130 Glycine max GLYMA01G44130 I 0.000
GLYMA01G44140 Glycine max GLYMA01G44140 I 0.000
GLYMA11G01640 Glycine max GLYMA11G01640 I 0.000
GRMZM2G087040 Zea mays GRMZM2G087040 N 0.000
GRMZM2G139740 Zea mays GRMZM2G139740 N 0.000
GSMUA_Achr11G12650_001 Musa acuminata GSMUA_Achr11G12650_001 N 0.000
GSMUA_Achr2G20760_001 Musa acuminata GSMUA_Achr2G20760_001 I 0.000
GSMUA_Achr8G16250_001 Musa acuminata GSMUA_Achr8G16250_001 I 0.000
LPERR02G16700 Leersia perrieri LPERR02G16700 N 0.000
LPERR04G10650 Leersia perrieri LPERR04G10650 N 0.000
LPERR11G07100 Leersia perrieri LPERR11G07100 I 0.000
MDP0000283350 Malus domestica MDP0000283350 I 0.000
MLOC_55144 Hordeum vulgare MLOC_55144 I 0.000
MTR_5g008590 Medicago truncatula MTR_5g008590 I 0.000
OB02G28310 Oryza brachyantha OB02G28310 N 0.000
OB11G16300 Oryza brachyantha OB11G16300 I 0.000
OGLUM02G20980 Oryza glumaepatula OGLUM02G20980 N 0.000
OGLUM11G07800 Oryza glumaepatula OGLUM11G07800 I 0.000
OMERI02G20440 Oryza meridionalis OMERI02G20440 N 0.000
OMERI04G12360 Oryza meridionalis OMERI04G12360 N 0.000
OMERI11G06840 Oryza meridionalis OMERI11G06840 I 0.000
ONIVA02G22690 Oryza nivara ONIVA02G22690 N 0.000
ONIVA04G11950 Oryza nivara ONIVA04G11950 N 0.000
ONIVA11G08160 Oryza nivara ONIVA11G08160 I 0.000
OPUNC02G18630 Oryza punctata OPUNC02G18630 N 0.000
OPUNC04G11630 Oryza punctata OPUNC04G11630 N 0.000
OPUNC11G07750 Oryza punctata OPUNC11G07750 I 0.000
orange1.1g035756m.g Citrus sinensis orange1.1g035756m.g I 0.000
orange1.1g046901m.g Citrus sinensis orange1.1g046901m.g I 0.000
ORGLA11G0070000 Oryza glaberrima ORGLA11G0070000 I 0.000
ORUFI02G21740 Oryza rufipogon ORUFI02G21740 N 0.000
ORUFI04G15010 Oryza rufipogon ORUFI04G15010 N 0.000
ORUFI11G08240 Oryza rufipogon ORUFI11G08240 I 0.000
OS02G0558700 Oryza sativa OS02G0558700 N 0.000
OS11G0242300 Oryza sativa OS11G0242300 I 0.000
Pavir.J22217 Panicum virgatum Pavir.J22217 I 0.000
Pavir.J26137 Panicum virgatum Pavir.J26137 I 0.000
Pm004269 Prunus mume Pm004269 I 0.000
PRUPE_ppa012354mg Prunus persica PRUPE_ppa012354mg I 0.000
SapurV1A.1130s0090 Salix purpurea SapurV1A.1130s0090 I 0.000
SapurV1A.1331s0050 Salix purpurea SapurV1A.1331s0050 I 0.000
Sb04g022943 Sorghum bicolor Sb04g022943 N 0.000
Sb05g007135 Sorghum bicolor Sb05g007135 I 0.000
Si026882m.g Setaria italica Si026882m.g I 0.000
TCM_036269 Theobroma cacao TCM_036269 I 0.000
Thhalv10010002m.g Eutrema salsugineum Thhalv10010002m.g I 0.000
Traes_2BL_9CD6E043A Triticum aestivum Traes_2BL_9CD6E043A I 0.000
Traes_4AL_D2D7703821 Triticum aestivum Traes_4AL_D2D7703821 I 0.000
Traes_4BS_DD5E68382 Triticum aestivum Traes_4BS_DD5E68382 I 0.000
Traes_4DS_97AC77E13 Triticum aestivum Traes_4DS_97AC77E13 I 0.000
TRIUR3_32168 Triticum urartu TRIUR3_32168 I 0.000
TRIUR3_32331 Triticum urartu TRIUR3_32331 I 0.000