Cucsa.132180 (Cucumis sativus)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Cucsa.132180 T261361_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.132180.1 MBD 11 113

Links

Other MBD family TFs
Other Cucumis sativus TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.712
BGIOSGA035814 Oryza indica BGIOSGA035814 N 0.704
BRADI4G21540 Brachypodium distachyon BRADI4G21540 N 0.746
cassava13512.valid.m1 Manihot esculenta cassava13512.valid.m1 N 0.716
cassava13513.valid.m1 Manihot esculenta cassava13513.valid.m1 N 0.716
Ca_06682 Cicer arietinum Ca_06682 N 0.712
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.716
Cla016961 Citrullus lanatus Cla016961 N 0.973
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.714
gene15686-v1.0-hybrid Fragaria vesca gene15686-v1.0-hybrid N 0.753
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.743
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.712
Gorai.001G042900 Gossypium raimondii Gorai.001G042900 N 0.750
LPERR12G16300 Leersia perrieri LPERR12G16300 N 0.714
Lus10002168.g Linum usitatissimum Lus10002168.g N 0.742
Lus10019406.g Linum usitatissimum Lus10019406.g N 0.710
Lus10030108.g Linum usitatissimum Lus10030108.g N 0.750
Lus10043263.g Linum usitatissimum Lus10043263.g N 0.721
MDP0000152128 Malus domestica MDP0000152128 N 0.703
MDP0000375866 Malus domestica MDP0000375866 N 0.703
MDP0000574053 Malus domestica MDP0000574053 N 0.703
OB12G26010 Oryza brachyantha OB12G26010 N 0.700
OBART12G19140 Oryza barthii OBART12G19140 N 0.704
OGLUM12G20810 Oryza glumaepatula OGLUM12G20810 N 0.704
OMERI12G13490 Oryza meridionalis OMERI12G13490 N 0.704
ONIVA02G25900 Oryza nivara ONIVA02G25900 N 0.704
OPUNC12G17310 Oryza punctata OPUNC12G17310 N 0.704
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N 0.703
ORGLA12G0164400 Oryza glaberrima ORGLA12G0164400 N 0.704
ORUFI12G21360 Oryza rufipogon ORUFI12G21360 N 0.704
OS12G0620400 Oryza sativa OS12G0620400 N 0.704
Pavir.Ca02859 Panicum virgatum Pavir.Ca02859 N 0.732
Pavir.J20491 Panicum virgatum Pavir.J20491 N 0.725
Pavir.J29994 Panicum virgatum Pavir.J29994 N 0.732
PGSC0003DMG400028533 Solanum tuberosum PGSC0003DMG400028533 N 0.712
PK04144.1 Cannabis sativa PK04144.1 N 0.716
Pm027560 Prunus mume Pm027560 N 0.712
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.726
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.770