ORGLA09G0181800 (Oryza glaberrima)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ORGLA09G0181800 T276817_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB30
M07089_2.00 		Arabidopsis thaliana
NHHHCAACYACYWHH
DDWRGTRGTTGDDDN		 Dap-seq
OMalley et al.(2016)
MYB30_col_a 		0.795 0.914
MYB30
M07090_2.00 		Arabidopsis thaliana
HHHYYHCCAACYAMY
RKTRGTTGGDRRDDD		 Dap-seq
OMalley et al.(2016)
MYB30_colamp_a 		0.795 0.914
MYB96
M07153_2.00 		Arabidopsis thaliana
HHHHHYHHCCAACYAHYWNHN
NDNWRDTRGTTGGDDRDDDDD		 Dap-seq
OMalley et al.(2016)
MYB96_colamp_a 		0.792 0.914
MYB96
M07154_2.00 		Arabidopsis thaliana
YAMCHNCCAMCHAHHHHH
DDDDDTDGKTGGNDGKTR		 Dap-seq
OMalley et al.(2016)
MYB96_col_b 		0.792 0.914
MYB94
M02298_2.00 		Arabidopsis thaliana
DACCGGTH
DACCGGTH		 PBM
Weirauch et al.(2014)
pTH7085 		0.789 0.903
MYB94
M07094_2.00 		Arabidopsis thaliana
HHNYHYCAACYACYWHHNN
NNDDWRGTRGTTGRDRNDD		 Dap-seq
OMalley et al.(2016)
MYB94_col_b 		0.789 0.903
MYB60
M07001_2.00 		Arabidopsis thaliana
HNNHYYCAACYACYWHHNN
NNDDWRGTRGTTGRRDNND		 Dap-seq
OMalley et al.(2016)
MYB60_col 		0.758 0.860
ATY13
M07035_2.00 		Arabidopsis thaliana
HAMCHMCCAMCHAHH
DDTDGKTGGKDGKTD		 Dap-seq
OMalley et al.(2016)
ATY13_col_a 		0.741 0.871
ATY13
M07036_2.00 		Arabidopsis thaliana
HAMCHHCCAACHAHH
DDTDGTTGGDDGKTD		 Dap-seq
OMalley et al.(2016)
ATY13_colamp_a 		0.741 0.871
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA09G0181800.1 Myb 14 61
ORGLA09G0181800.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Oryza glaberrima TFs

308 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29212.m000177 Ricinus communis 29212.m000177 N 0.000
AMTR_s00009p00257950 Amborella trichopoda AMTR_s00009p00257950 N 0.000
AMTR_s00133p00075670 Amborella trichopoda AMTR_s00133p00075670 N 0.000
MYB3 Arabidopsis thaliana AT1G22640 D 0.000
MYB95 Arabidopsis thaliana AT1G74430 N 0.000
ATY13 Arabidopsis thaliana AT1G74650 D 0.741
AtMYB41 Arabidopsis thaliana AT4G28110 D 0.000
AtMYB40 Arabidopsis thaliana AT5G14340 D 0.000
BGIOSGA010548 Oryza indica BGIOSGA010548 N 0.000
Bostr.13129s0196 Boechera stricta Bostr.13129s0196 I 0.000
BRADI4G04050 Brachypodium distachyon BRADI4G04050 I 0.000
Cagra.0876s0043 Capsella grandiflora Cagra.0876s0043 N 0.000
Cagra.5789s0001 Capsella grandiflora Cagra.5789s0001 N 0.000
Cagra.7160s0001 Capsella grandiflora Cagra.7160s0001 N 0.000
cassava15703.m1 Manihot esculenta cassava15703.m1 N 0.000
cassava2659.m1 Manihot esculenta cassava2659.m1 N 0.000
cassava2662.m1 Manihot esculenta cassava2662.m1 N 0.000
cassava45648.m1 Manihot esculenta cassava45648.m1 N 0.000
Ca_10215 Cicer arietinum Ca_10215 N 0.000
chr1.CM0600.120.nd Lotus japonicus chr1.CM0600.120.nd N 0.000
chr5.CM0071.390.nd Lotus japonicus chr5.CM0071.390.nd N 0.000
Ciclev10023519m.g Citrus clementina Ciclev10023519m.g N 0.000
CM0385.220.nd Lotus japonicus CM0385.220.nd N 0.000
EMIHUDRAFT_256335 Emiliania huxleyi EMIHUDRAFT_256335 N 0.000
Eucgr.B03766 Eucalyptus grandis Eucgr.B03766 N 0.000
evm.TU.supercontig_34.3 Carica papaya evm.TU.supercontig_34.3 N 0.000
e_gw1.1.4.1 Physcomitrella patens e_gw1.1.4.1 N 0.000
gene16736-v1.0-hybrid Fragaria vesca gene16736-v1.0-hybrid N 0.000
gene24516-v1.0-hybrid Fragaria vesca gene24516-v1.0-hybrid N 0.000
GLYMA0041S00310 Glycine max GLYMA0041S00310 I 0.000
GLYMA05G03780 Glycine max GLYMA05G03780 I 0.000
GLYMA09G04370 Glycine max GLYMA09G04370 I 0.000
Gorai.001G239000 Gossypium raimondii Gorai.001G239000 I 0.756
Gorai.008G086400 Gossypium raimondii Gorai.008G086400 I 0.000
GRMZM2G001223 Zea mays GRMZM2G001223 I 0.000
GRMZM2G051528 Zea mays GRMZM2G051528 I 0.000
LjSGA_014958.1 Lotus japonicus LjSGA_014958.1 N 0.000
LjSGA_034303.1 Lotus japonicus LjSGA_034303.1 N 0.000
LjSGA_057038.1 Lotus japonicus LjSGA_057038.1 N 0.000
LjSGA_057664.1 Lotus japonicus LjSGA_057664.1 N 0.000
MDP0000119369 Malus domestica MDP0000119369 N 0.000
MDP0000911051 Malus domestica MDP0000911051 N 0.000
mgf018056m Mimulus guttatus mgf018056m N 0.000
mgf020736m Mimulus guttatus mgf020736m N 0.000
mgf023771m Mimulus guttatus mgf023771m N 0.000
mgf025944m Mimulus guttatus mgf025944m N 0.000
MLOC_12474 Hordeum vulgare MLOC_12474 N 0.000
MLOC_13019 Hordeum vulgare MLOC_13019 I 0.000
MLOC_39554 Hordeum vulgare MLOC_39554 I 0.000
MLOC_59184 Hordeum vulgare MLOC_59184 N 0.000
MLOC_59663 Hordeum vulgare MLOC_59663 I 0.000
MLOC_68511 Hordeum vulgare MLOC_68511 I 0.771
MTR_1g087540 Medicago truncatula MTR_1g087540 N 0.000
MTR_4g063100 Medicago truncatula MTR_4g063100 I 0.000
OB06G28240 Oryza brachyantha OB06G28240 N 0.000
OLONG_005719 Oryza longistaminata OLONG_005719 N 0.000
ORGLA02G0219000 Oryza glaberrima ORGLA02G0219000 N 0.000
OS01G0685400 Oryza sativa OS01G0685400 N 0.000
OS04G0517100 Oryza sativa OS04G0517100 N 0.000
OS12G0515300 Oryza sativa OS12G0515300 N 0.000
Pavir.Db00878 Panicum virgatum Pavir.Db00878 N 0.000
Pavir.Eb02286 Panicum virgatum Pavir.Eb02286 N 0.000
Pavir.J06554 Panicum virgatum Pavir.J06554 N 0.000
Pavir.J14839 Panicum virgatum Pavir.J14839 N 0.000
Pavir.J25377 Panicum virgatum Pavir.J25377 N 0.000
PDK_20s1922781g001 Phoenix dactylifera PDK_20s1922781g001 N 0.000
PGSC0003DMG400004610 Solanum tuberosum PGSC0003DMG400004610 N 0.000
PGSC0003DMG400013215 Solanum tuberosum PGSC0003DMG400013215 I 0.000
PK21717.1 Cannabis sativa PK21717.1 N 0.000
Pm000007 Prunus mume Pm000007 N 0.000
Pm015551 Prunus mume Pm015551 N 0.000
POPTR_0013s05310 Populus trichocarpa POPTR_0013s05310 I 0.000
POPTR_0017s10780 Populus trichocarpa POPTR_0017s10780 N 0.000
SapurV1A.0006s0790 Salix purpurea SapurV1A.0006s0790 I 0.000
SapurV1A.0876s0040 Salix purpurea SapurV1A.0876s0040 I 0.758
TCM_041010 Theobroma cacao TCM_041010 I 0.000
Traes_1BL_A44464337 Triticum aestivum Traes_1BL_A44464337 N 0.000
Traes_4BL_61E35C455 Triticum aestivum Traes_4BL_61E35C455 N 0.000
Traes_5AS_D238844BB Triticum aestivum Traes_5AS_D238844BB N 0.000
Traes_7AS_ADDEF000C Triticum aestivum Traes_7AS_ADDEF000C N 0.000
Traes_7AS_FD974A17F Triticum aestivum Traes_7AS_FD974A17F N 0.000
Traes_7DS_76515C538 Triticum aestivum Traes_7DS_76515C538 N 0.000