Bra009456 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra009456 T292564_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC078
M02372_2.00 		Arabidopsis thaliana
NNRCAMGHMANN
NNTKDCKTGYNN		 PBM
Weirauch et al.(2014)
pTH7209 		0.964 0.982
NAC078
M07226_2.00 		Arabidopsis thaliana
TTDCTTGNDNNDCAAG
CTTGHNNHNCAAGHAA		 Dap-seq
OMalley et al.(2016)
NAC2_colamp_a 		0.964 0.982
NAC078
M07227_2.00 		Arabidopsis thaliana
DTTWCTTGNNNNRCAAG
CTTGYNNNNCAAGWAAH		 Dap-seq
OMalley et al.(2016)
NAC2_col_v3a 		0.964 0.982
NAC078
M11083_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC078_Q2 		0.964 0.982
NAC053
M07202_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAG
CTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_colamp_a 		0.957 0.947
NAC053
M07203_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAGH
DCTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_col 		0.957 0.947
NAC053
M11079_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G10500_Q2 		0.957 0.947
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra009456.1-P NAC/NAM 10 136

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10013622m.g Citrus clementina Ciclev10013622m.g N 0.000
Ciclev10013626m.g Citrus clementina Ciclev10013626m.g N 0.000
Ciclev10013730m.g Citrus clementina Ciclev10013730m.g N 0.000
Ciclev10023292m.g Citrus clementina Ciclev10023292m.g N 0.000
Ciclev10031100m.g Citrus clementina Ciclev10031100m.g N 0.000
Ciclev10033346m.g Citrus clementina Ciclev10033346m.g N 0.000
Ciclev10033436m.g Citrus clementina Ciclev10033436m.g N 0.000
Ciclev10033459m.g Citrus clementina Ciclev10033459m.g N 0.000
Ciclev10033526m.g Citrus clementina Ciclev10033526m.g N 0.000
Ciclev10033536m.g Citrus clementina Ciclev10033536m.g N 0.000
Ciclev10033541m.g Citrus clementina Ciclev10033541m.g N 0.000
Ciclev10033744m.g Citrus clementina Ciclev10033744m.g N 0.000
Ciclev10033957m.g Citrus clementina Ciclev10033957m.g N 0.000
Eucgr.B03693 Eucalyptus grandis Eucgr.B03693 N 0.000
Eucgr.B03703 Eucalyptus grandis Eucgr.B03703 N 0.000
Eucgr.L02674 Eucalyptus grandis Eucgr.L02674 N 0.000
orange1.1g008335m.g Citrus sinensis orange1.1g008335m.g N 0.000
orange1.1g038876m.g Citrus sinensis orange1.1g038876m.g N 0.000
orange1.1g041697m.g Citrus sinensis orange1.1g041697m.g N 0.000
orange1.1g042765m.g Citrus sinensis orange1.1g042765m.g N 0.000
orange1.1g043513m.g Citrus sinensis orange1.1g043513m.g N 0.000
orange1.1g044940m.g Citrus sinensis orange1.1g044940m.g N 0.000
orange1.1g045647m.g Citrus sinensis orange1.1g045647m.g N 0.000
orange1.1g046003m.g Citrus sinensis orange1.1g046003m.g N 0.000
PGSC0003DMG400036651 Solanum tuberosum PGSC0003DMG400036651 N 0.000
Si004703m.g Setaria italica Si004703m.g N 0.000
Thhalv10015488m.g Eutrema salsugineum Thhalv10015488m.g N 0.000
VIT_19s0027g00230 Vitis vinifera VIT_19s0027g00230 N 0.000