CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PDK_20s1410211g002
(
Phoenix dactylifera
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
PDK_20s1410211g002
T299517_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK11990.1
M01290_2.00
Cannabis sativa
DNAHDNHDNN
NNHDNHDTNH
PBM
Lambert et al.(2019)
pTH11336
0.901
0.790
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1410211g002
NAC/NAM
36
161
YEEQVILPPDSQKLHPLIDEFIPTIEGENGICYTHPEKLPGVSRDGLIRHFFHRPSKAYTTGTRKRRKVHTDAHGGETRWHKTGKTRPVLVGGKLMGYKKILVLYTNYGKQRKPEKTNWVMHQYHL
Links
Other
NAC/NAM
family TFs
Other
Phoenix dactylifera
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29983.m003255
Ricinus communis
29983.m003255
N
0.000
BGIOSGA000702
Oryza indica
BGIOSGA000702
N
0.000
BRADI2G51790
Brachypodium distachyon
BRADI2G51790
N
0.000
Eucgr.K00939
Eucalyptus grandis
Eucgr.K00939
N
0.000
Gorai.005G204800
Gossypium raimondii
Gorai.005G204800
N
0.000
GRMZM2G004690
Zea mays
GRMZM2G004690
N
0.000
GRMZM2G082745
Zea mays
GRMZM2G082745
N
0.000
GSMUA_Achr1G08820_001
Musa acuminata
GSMUA_Achr1G08820_001
N
0.000
GSMUA_Achr2G02900_001
Musa acuminata
GSMUA_Achr2G02900_001
N
0.000
GSMUA_AchrUn_randomG13850_001
Musa acuminata
GSMUA_AchrUn_randomG13850_001
N
0.000
LPERR01G28620
Leersia perrieri
LPERR01G28620
N
0.000
Lus10018560.g
Linum usitatissimum
Lus10018560.g
N
0.000
Lus10039791.g
Linum usitatissimum
Lus10039791.g
N
0.000
MDP0000089136
Malus domestica
MDP0000089136
N
0.000
OB01G42000
Oryza brachyantha
OB01G42000
N
0.000
OBART01G33150
Oryza barthii
OBART01G33150
N
0.000
OGLUM01G37340
Oryza glumaepatula
OGLUM01G37340
N
0.000
OLONG_014986
Oryza longistaminata
OLONG_014986
N
0.000
OMERI01G30050
Oryza meridionalis
OMERI01G30050
N
0.000
ONIVA01G37460
Oryza nivara
ONIVA01G37460
N
0.000
OPUNC01G32160
Oryza punctata
OPUNC01G32160
N
0.000
ORGLA01G0271200
Oryza glaberrima
ORGLA01G0271200
N
0.000
ORUFI01G36290
Oryza rufipogon
ORUFI01G36290
N
0.000
OS01G0780800
Oryza sativa
OS01G0780800
N
0.000
PK16281.1
Cannabis sativa
PK16281.1
N
0.000
SapurV1A.0492s0170
Salix purpurea
SapurV1A.0492s0170
N
0.000
Sb03g036430
Sorghum bicolor
Sb03g036430
N
0.000
Si002762m.g
Setaria italica
Si002762m.g
N
0.000