CBN00299 (Caenorhabditis brenneri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBN00299 T301649_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-182
M00701_2.00
Caenorhabditis elegans
DWBYGTGWCH

DGWCACRVWH
PBM
Narasimhan et al.(2015)
pTH10779
0.857 0.514
nhr-182
M00702_2.00
Caenorhabditis elegans
NNNHRTRNHN

NDNYAYDNNN
PBM
Narasimhan et al.(2015)
pTH6106
0.857 0.514
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN00299 Nuclear receptor 9 80

Links

Other Nuclear receptor family TFs
Other Caenorhabditis brenneri TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAB05479 Xenopus laevis AAB05479 I 0.000
Aan_R011115 Calypte anna Aan_R011115 I 0.000
ACEP17167 Atta cephalotes ACEP17167 I 0.000
ACYPI001225 Acyrthosiphon pisum ACYPI001225 I 0.000
Afo_R009248 Aptenodytes forsteri Afo_R009248 I 0.000
Alligator_sinensis_CCG006987.1 Alligator sinensis Alligator_sinensis_CCG006987.1 I 0.000
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 I 0.000
BGIBMGA003113 Bombyx mori BGIBMGA003113 I 0.000
Brh_R001357 Buceros rhinoceros Brh_R001357 I 0.000
CapteG179039 Capitella teleta CapteG179039 I 0.000
Cflo_01916--XP_397309.1_APIME Camponotus floridanus Cflo_01916--XP_397309.1_APIME I 0.000
CGI_10018383 Crassostrea gigas CGI_10018383 I 0.000
CLEC005205 Cimex lectularius CLEC005205 I 0.000
Cmyd_10010997 Chelonia mydas Cmyd_10010997 I 0.000
D915_08967 Fasciola hepatica D915_08967 I 0.000
D915_08968 Fasciola hepatica D915_08968 I 0.000
RBPJ Anolis carolinensis ENSACAG00000014578 I 0.000
ENSAMEG00000018082 Ailuropoda melanoleuca ENSAMEG00000018082 I 0.000
ENSAMXG00000011180 Astyanax mexicanus ENSAMXG00000011180 I 0.000
ENSAPLG00000007512 Anas platyrhynchos ENSAPLG00000007512 I 0.000
RBPJ Bos taurus ENSBTAG00000003602 I 0.000
ENSBTAP00000004696-D1 Bos grunniens ENSBTAP00000004696-D1 I 0.000
RBPJ Canis familiaris ENSCAFG00000016387 I 0.000
RBPJ Choloepus hoffmanni ENSCHOG00000001582 I 0.000
su(h) Ciona intestinalis ENSCING00000000838 I 0.000
RBPJ Callithrix jacchus ENSCJAG00000021033 I 0.000
RBPJ Cavia porcellus ENSCPOG00000007041 I 0.000
ENSCSAVG00000010744 Ciona savignyi ENSCSAVG00000010744 I 0.000
rbpja Danio rerio ENSDARG00000003398 I 0.000
rbpjb Danio rerio ENSDARG00000052091 I 0.000
RBPJ Dasypus novemcinctus ENSDNOG00000035383 I 0.000
Rbpj Dipodomys ordii ENSDORG00000006352 I 0.000
RBPJ Equus caballus ENSECAG00000019257 I 0.000
RBPJ Erinaceus europaeus ENSEEUG00000009686 I 0.000
ENSFALG00000009154 Ficedula albicollis ENSFALG00000009154 I 0.000
RBPJ Felis catus ENSFCAG00000030363 I 0.000
RBPJ Homo sapiens ENSG00000168214 D 0.000
rbpja Gasterosteus aculeatus ENSGACG00000015888 I 0.000
RBPJ Gallus gallus ENSGALG00000014365 I 0.000
RBPJ Gorilla gorilla ENSGGOG00000004582 I 0.000
ENSGMOG00000004951 Gadus morhua ENSGMOG00000004951 I 0.000
ENSGMOG00000006156 Gadus morhua ENSGMOG00000006156 I 0.000
ENSLACG00000007296 Latimeria chalumnae ENSLACG00000007296 I 0.000
RBPJ Loxodonta africana ENSLAFG00000000410 I 0.000
ENSLOCG00000009731 Lepisosteus oculatus ENSLOCG00000009731 I 0.000
RBPJ Meleagris gallopavo ENSMGAG00000012418 I 0.000
RBPJ Myotis lucifugus ENSMLUG00000017187 I 0.000
RBPJ Macaca mulatta ENSMMUG00000015828 I 0.000
RBPJ Monodelphis domestica ENSMODG00000000129 I 0.000
ENSMPUG00000016715 Mustela putorius furo ENSMPUG00000016715 I 0.000
Rbpj Mus musculus ENSMUSG00000039191 D 0.000
ENSNLEG00000016895 Nomascus leucogenys ENSNLEG00000016895 I 0.000
RBPJ Ornithorhynchus anatinus ENSOANG00000006699 I 0.000
ENSOARG00000008166 Ovis aries ENSOARG00000008166 I 0.000
RBPJ Oryctolagus cuniculus ENSOCUG00000013449 I 0.000
RBPJ Otolemur garnettii ENSOGAG00000007913 I 0.000
ENSONIG00000008873 Oreochromis niloticus ENSONIG00000008873 I 0.000
ENSONIG00000009281 Oreochromis niloticus ENSONIG00000009281 I 0.000
ENSP00000354528 Macaca fascicularis ENSP00000354528 I 0.000
ENSPANG00000021176 Papio anubis ENSPANG00000021176 I 0.000
ENSPFOG00000012004 Poecilia formosa ENSPFOG00000012004 I 0.000
ENSPFOG00000016494 Poecilia formosa ENSPFOG00000016494 I 0.000
ENSPPYG00000014652 Pongo abelii ENSPPYG00000014652 I 0.000
ENSPSIG00000016822 Pelodiscus sinensis ENSPSIG00000016822 I 0.000
RBPJ Pan troglodytes ENSPTRG00000015968 I 0.000
RBPJ Pteropus vampyrus ENSPVAG00000014199 I 0.000
Rbpj Rattus norvegicus ENSRNOG00000046327 I 0.000
RBPJ Sorex araneus ENSSARG00000001169 I 0.000
ENSSHAG00000003329 Sarcophilus harrisii ENSSHAG00000003329 I 0.000
RBPJ Sus scrofa ENSSSCG00000022155 I 0.000
ENSSTOG00000004547 Ictidomys tridecemlineatus ENSSTOG00000004547 I 0.000
RBPJ Tupaia belangeri ENSTBEG00000002676 I 0.000
RBPJ Taeniopygia guttata ENSTGUG00000009245 I 0.000
RBPJ Tetraodon nigroviridis ENSTNIG00000012994 I 0.000
RBPJ Takifugu rubripes ENSTRUG00000014798 I 0.000
ENSTSYG00000001894 Tarsius syrichta ENSTSYG00000001894 I 0.000
RBPJ Tursiops truncatus ENSTTRG00000009022 I 0.000
ENSVPAG00000005031 Vicugna pacos ENSVPAG00000005031 I 0.000
ENSXMAG00000009877 Xiphophorus maculatus ENSXMAG00000009877 I 0.000
ENSXMAG00000012207 Xiphophorus maculatus ENSXMAG00000012207 I 0.000
fgenesh2_pg.scaffold_60000013 Branchiostoma floridae fgenesh2_pg.scaffold_60000013 I 0.000
GB45655 Apis mellifera GB45655 I 0.000
Gfo_R010339 Geospiza fortis Gfo_R010339 I 0.000
GPLIN_001569000 Globodera pallida GPLIN_001569000 I 0.000
HHAL001644-PA Halyomorpha halys HHAL001644-PA I 0.000
HMEL017244 Heliconius melpomene HMEL017244 I 0.000
Hsal_09918--XP_397309.1_APIME Harpegnathos saltator Hsal_09918--XP_397309.1_APIME I 0.000
ISCW010197 Ixodes scapularis ISCW010197 I 0.000
KGM_08407 Danaus plexippus KGM_08407 I 0.000
L798_15068 Zootermopsis nevadensis L798_15068 I 0.000
LDEC018359 Leptinotarsa decemlineata LDEC018359 I 0.000
LotgiG159505 Lottia gigantea LotgiG159505 I 0.000
Myotis_brandtii_RBPJ_10027377 Myotis brandtii Myotis_brandtii_RBPJ_10027377 I 0.000
NV17858 Nasonia vitripennis NV17858 I 0.000
PHUM462870 Pediculus humanus PHUM462870 I 0.000
Pvit_10584 Pogona vitticeps Pvit_10584 I 0.000
Sakowv30027441m.g Saccoglossus kowalevskii Sakowv30027441m.g I 0.000
scaffold595-EXSNAP2012.9 Pristionchus exspectatus scaffold595-EXSNAP2012.9 I 0.000
SCUD_0000326701 Schistosoma curassoni SCUD_0000326701 I 0.000
SINV15808 Solenopsis invicta SINV15808 I 0.000
Sjc_0108400 Schistosoma japonicum Sjc_0108400 I 0.000
SMAR001432 Strigamia maritima SMAR001432 I 0.000
SMRZ_0000802101 Schistosoma margrebowiei SMRZ_0000802101 I 0.000
SMTD_0001089601 Schistosoma mattheei SMTD_0001089601 I 0.000
Tal_R001466 Tyto alba Tal_R001466 I 0.000
TC014468 Tribolium castaneum TC014468 I 0.000
TRE_0000568701 Trichobilharzia regenti TRE_0000568701 I 0.000
rbpj Xenopus tropicalis XB-GENE-490756 I 0.000
rbpj.S Xenopus laevis XB-GENE-865998 I 0.000
YQE_03219 Dendroctonus ponderosae YQE_03219 I 0.000