CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE27296
(
Caenorhabditis remanei
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CRE27296
T302297_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE27296
Nuclear receptor
1
67
MMCQVCGADGAEPHFGGVSCRACAAFFRRYVHSRKMQITCTCKQRLASSHPCRHCRMLKCIATGMIK
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis remanei
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29794.m003447
Ricinus communis
29794.m003447
I
Aquca_013_00366
Aquilegia coerulea
Aquca_013_00366
I
PC-MYB1
Arabidopsis thaliana
AT4G32730
D
Bostr.7867s1124
Boechera stricta
Bostr.7867s1124
I
cassava40167.m1
Manihot esculenta
cassava40167.m1
I
Ciclev10007316m.g
Citrus clementina
Ciclev10007316m.g
I
Cla022565
Citrullus lanatus
Cla022565
I
Cucsa.161430
Cucumis sativus
Cucsa.161430
I
Eucgr.C02893
Eucalyptus grandis
Eucgr.C02893
I
evm.TU.supercontig_18.208
Carica papaya
evm.TU.supercontig_18.208
N
evm.TU.supercontig_78.76
Carica papaya
evm.TU.supercontig_78.76
I
PC-MYB1
Arabidopsis lyrata
fgenesh2_kg.7__866__AT4G32730.2
I
gene19115-v1.0-hybrid
Fragaria vesca
gene19115-v1.0-hybrid
I
GLYMA04G08550
Glycine max
GLYMA04G08550
I
GLYMA06G08660
Glycine max
GLYMA06G08660
I
Gorai.008G117400
Gossypium raimondii
Gorai.008G117400
N
Gorai.009G051000
Gossypium raimondii
Gorai.009G051000
I
Gorai.010G110000
Gossypium raimondii
Gorai.010G110000
I
MDP0000295807
Malus domestica
MDP0000295807
I
MTR_3g110028
Medicago truncatula
MTR_3g110028
I
OBART01G08110
Oryza barthii
OBART01G08110
I
OGLUM01G09290
Oryza glumaepatula
OGLUM01G09290
I
OLONG_011886
Oryza longistaminata
OLONG_011886
I
ONIVA01G10670
Oryza nivara
ONIVA01G10670
I
PDK_20s1371143g001
Phoenix dactylifera
PDK_20s1371143g001
I
Pm018007
Prunus mume
Pm018007
I
POPTR_0006s25840
Populus trichocarpa
POPTR_0006s25840
I
PRUPE_ppa022218mg
Prunus persica
PRUPE_ppa022218mg
I
Q948S4_TOBAC
Nicotiana tabacum
Q948S4_TOBAC
D
SapurV1A.0283s0180
Salix purpurea
SapurV1A.0283s0180
I
SapurV1A.0446s0220
Salix purpurea
SapurV1A.0446s0220
I
Solyc08g080580.2
Solanum lycopersicum
Solyc08g080580.2
I
TCM_047091
Theobroma cacao
TCM_047091
I
ATMYB3R2
Vitis vinifera
VIT_15s0048g02120
N