CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
L798_02049
(
Zootermopsis nevadensis
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05225 (HTH_psq)
IPR007889
L798_02049
T313840_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KDR22086
Pipsqueak
313
358
TEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERER
KDR22086
Pipsqueak
797
842
DRDSLIEAVRAVQRGEMSVHRAGSHFGVPHSTLEYKVKERHLMRPR
Links
Other
Pipsqueak
family TFs
Other
Zootermopsis nevadensis
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT4G03250
Arabidopsis thaliana
AT4G03250
I
Bo9g006450
Brassica oleracea
Bo9g006450
I
Bostr.2983s0116
Boechera stricta
Bostr.2983s0116
I
Bra034196
Brassica rapa
Bra034196
I
Cagra.2552s0003
Capsella grandiflora
Cagra.2552s0003
I
Carubv10002996m.g
Capsella rubella
Carubv10002996m.g
I
Ca_21400
Cicer arietinum
Ca_21400
I
Ciclev10014928m.g
Citrus clementina
Ciclev10014928m.g
I
Eucgr.J00701
Eucalyptus grandis
Eucgr.J00701
I
fgenesh1_pg.scaffold_15000027
Physcomitrella patens
fgenesh1_pg.scaffold_15000027
I
GLYMA08G41330
Glycine max
GLYMA08G41330
I
GLYMA18G14910
Glycine max
GLYMA18G14910
I
PDK_20s1551001g001
Phoenix dactylifera
PDK_20s1551001g001
I
PK25011.1
Cannabis sativa
PK25011.1
D
POPTR_0001s28350
Populus trichocarpa
POPTR_0001s28350
I
POPTR_0009s07600
Populus trichocarpa
POPTR_0009s07600
I
SapurV1A.0042s0570
Salix purpurea
SapurV1A.0042s0570
I
SapurV1A.0106s0340
Salix purpurea
SapurV1A.0106s0340
I
VIT_06s0009g03530
Vitis vinifera
VIT_06s0009g03530
I