SapurV1A.0042s0570 (Salix purpurea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SapurV1A.0042s0570 T229401_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK25011.1
M01253_2.00 		Cannabis sativa
NNWYRMDBNN
NNVHKYRWNN		 PBM
Lambert et al.(2019)
pTH11258 		0.626 0.839
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0042s0570.10.p Homeodomain 1 29
SapurV1A.0042s0570.1.p Homeodomain 20 75
SapurV1A.0042s0570.2.p Homeodomain 20 75
SapurV1A.0042s0570.3.p Homeodomain 6 61
SapurV1A.0042s0570.4.p Homeodomain 20 75
SapurV1A.0042s0570.5.p Homeodomain 1 29
SapurV1A.0042s0570.6.p Homeodomain 1 29
SapurV1A.0042s0570.7.p Homeodomain 20 75
SapurV1A.0042s0570.8.p Homeodomain 20 75
SapurV1A.0042s0570.9.p Homeodomain 1 29

Links

Other Homeodomain family TFs
Other Salix purpurea TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.013G254100 Gossypium raimondii Gorai.013G254100 I 0.867
cassava31027.valid.m1 Manihot esculenta cassava31027.valid.m1 N 0.831
gene14635-v1.0-hybrid Fragaria vesca gene14635-v1.0-hybrid N 0.829
PGSC0003DMG400004714 Solanum tuberosum PGSC0003DMG400004714 I 0.826
LjSGA_012738.1 Lotus japonicus LjSGA_012738.1 N 0.816
GLYMA08G38930 Glycine max GLYMA08G38930 N 0.810
Pm012761 Prunus mume Pm012761 N 0.802
POPTR_0009s07600 Populus trichocarpa POPTR_0009s07600 I 0.801
SapurV1A.0106s0340 Salix purpurea SapurV1A.0106s0340 I 0.800
Gorai.004G014700 Gossypium raimondii Gorai.004G014700 I 0.798
Bo9g006410 Brassica oleracea Bo9g006410 N 0.795
scaffold_603934.1 Arabidopsis lyrata scaffold_603934.1 N 0.795
POPTR_0001s28350 Populus trichocarpa POPTR_0001s28350 I 0.789
TCM_040945 Theobroma cacao TCM_040945 I 0.777
ORUFI05G12600 Oryza rufipogon ORUFI05G12600 N 0.741
TCM_008214 Theobroma cacao TCM_008214 I 0.736
Aquca_014_00610 Aquilegia coerulea Aquca_014_00610 I 0.691
OBART05G11630 Oryza barthii OBART05G11630 N 0.649
Ciclev10014928m.g Citrus clementina Ciclev10014928m.g I 0.643
orange1.1g010311m.g Citrus sinensis orange1.1g010311m.g I 0.643
OB01G35260 Oryza brachyantha OB01G35260 N 0.642
OBART01G26120 Oryza barthii OBART01G26120 N 0.642
OLONG_014924 Oryza longistaminata OLONG_014924 N 0.642
D915_07707 Fasciola hepatica D915_07707 N 0.638
BGIOSGA019617 Oryza indica BGIOSGA019617 N 0.636
ENSDNOG00000038094 Dasypus novemcinctus ENSDNOG00000038094 N 0.636
GSMUA_Achr8G27210_001 Musa acuminata GSMUA_Achr8G27210_001 N 0.636
GSMUA_Achr9G06610_001 Musa acuminata GSMUA_Achr9G06610_001 N 0.636
ONIVA05G12010 Oryza nivara ONIVA05G12010 N 0.636
POPTR_0004s04840 Populus trichocarpa POPTR_0004s04840 N 0.636
DICVIV_12877 Dictyocaulus viviparus DICVIV_12877 N 0.636
OESDEN_18963 Oesophagostomum dentatum OESDEN_18963 N 0.636
PK25011.1 Cannabis sativa PK25011.1 D 0.626
Bostr.2983s0116 Boechera stricta Bostr.2983s0116 I 0.620
Cagra.2552s0003 Capsella grandiflora Cagra.2552s0003 I 0.620
Carubv10002996m.g Capsella rubella Carubv10002996m.g I 0.620
Bo9g006450 Brassica oleracea Bo9g006450 I 0.615
Bra034196 Brassica rapa Bra034196 I 0.615
AT4G03250 Arabidopsis thaliana AT4G03250 I 0.614
Gorai.001G134800 Gossypium raimondii Gorai.001G134800 I 0.614
PDK_20s1551001g001 Phoenix dactylifera PDK_20s1551001g001 I 0.605
BTMF_0000474601 Brugia timori BTMF_0000474601 N 0.603
mgf007720m Mimulus guttatus mgf007720m I 0.602
CABZ01080370.1 Danio rerio ENSDARG00000102550 N 0.600
cassava16534.m1 Manihot esculenta cassava16534.m1 I 0.600