gene14635-v1.0-hybrid (Fragaria vesca)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 gene14635-v1.0-hybrid T228609_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna14635.1-v1.0-hybrid Homeodomain 1 29

Links

Other Homeodomain family TFs
Other Fragaria vesca TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400004714 Solanum tuberosum PGSC0003DMG400004714 I 0.848
GLYMA08G38930 Glycine max GLYMA08G38930 N 0.843
LjSGA_012738.1 Lotus japonicus LjSGA_012738.1 N 0.837
Gorai.013G254100 Gossypium raimondii Gorai.013G254100 I 0.829
SapurV1A.0042s0570 Salix purpurea SapurV1A.0042s0570 I 0.829
scaffold_603934.1 Arabidopsis lyrata scaffold_603934.1 N 0.823
Bo9g006410 Brassica oleracea Bo9g006410 N 0.817
Pm012761 Prunus mume Pm012761 N 0.812
cassava31027.valid.m1 Manihot esculenta cassava31027.valid.m1 N 0.793
Gorai.004G014700 Gossypium raimondii Gorai.004G014700 I 0.766
ORUFI05G12600 Oryza rufipogon ORUFI05G12600 N 0.739
TCM_008214 Theobroma cacao TCM_008214 I 0.729
OBART05G11630 Oryza barthii OBART05G11630 N 0.653
ENSDNOG00000038094 Dasypus novemcinctus ENSDNOG00000038094 N 0.642
BGIOSGA019617 Oryza indica BGIOSGA019617 N 0.640
ONIVA05G12010 Oryza nivara ONIVA05G12010 N 0.640
POPTR_0004s04840 Populus trichocarpa POPTR_0004s04840 N 0.640
D915_07707 Fasciola hepatica D915_07707 N 0.636
DICVIV_12877 Dictyocaulus viviparus DICVIV_12877 N 0.636
OESDEN_18963 Oesophagostomum dentatum OESDEN_18963 N 0.636
GSMUA_Achr8G27210_001 Musa acuminata GSMUA_Achr8G27210_001 N 0.634
GSMUA_Achr9G06610_001 Musa acuminata GSMUA_Achr9G06610_001 N 0.634
OB01G35260 Oryza brachyantha OB01G35260 N 0.634
OBART01G26120 Oryza barthii OBART01G26120 N 0.634
OLONG_014924 Oryza longistaminata OLONG_014924 N 0.634
BTMF_0000474601 Brugia timori BTMF_0000474601 N 0.601