Bra038403 (Brassica rapa)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04640 (PLATZ) IPR006734 Bra038403 T315287_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra038403.1-P PLATZ 73 143

Links

Other PLATZ family TFs
Other Brassica rapa TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29417.m000034 Ricinus communis 29417.m000034 N 0.903
30090.m000247 Ricinus communis 30090.m000247 N 0.722
AMTR_s00032p00241350 Amborella trichopoda AMTR_s00032p00241350 N 0.761
AMTR_s00033p00166000 Amborella trichopoda AMTR_s00033p00166000 N 0.722
AMTR_s00059p00116150 Amborella trichopoda AMTR_s00059p00116150 N 0.736
AT1G31040 Arabidopsis thaliana AT1G31040 N 0.958
BGIOSGA007635 Oryza indica BGIOSGA007635 N 0.819
BGIOSGA023427 Oryza indica BGIOSGA023427 N 0.778
Bo2g121040 Brassica oleracea Bo2g121040 N 1.000
Bo7g041160 Brassica oleracea Bo7g041160 N 0.986
Bostr.15697s0409 Boechera stricta Bostr.15697s0409 N 0.986
Bra014899 Brassica rapa Bra014899 N 0.986
BRADI1G32050 Brachypodium distachyon BRADI1G32050 N 0.792
BRADI3G05380 Brachypodium distachyon BRADI3G05380 N 0.792
Cagra.1508s0089 Capsella grandiflora Cagra.1508s0089 N 0.986
Carubv10011663m.g Capsella rubella Carubv10011663m.g N 0.986
cassava11490.m1 Manihot esculenta cassava11490.m1 N 0.889
cassava41034.m1 Manihot esculenta cassava41034.m1 N 0.708
cassava446.valid.m1 Manihot esculenta cassava446.valid.m1 N 0.708
Ca_06740 Cicer arietinum Ca_06740 N 0.708
chr6.CM0037.1230.nd Lotus japonicus chr6.CM0037.1230.nd N 0.708
Ciclev10016385m.g Citrus clementina Ciclev10016385m.g N 0.847
Cla010042 Citrullus lanatus Cla010042 N 0.889
Cla019628 Citrullus lanatus Cla019628 N 0.797
Cucsa.048750 Cucumis sativus Cucsa.048750 N 0.889
Cucsa.132770 Cucumis sativus Cucsa.132770 N 0.708
Cucsa.134530 Cucumis sativus Cucsa.134530 N 0.797
Eucgr.D00032 Eucalyptus grandis Eucgr.D00032 N 0.833
Eucgr.E00457 Eucalyptus grandis Eucgr.E00457 N 0.704
Eucgr.E04309 Eucalyptus grandis Eucgr.E04309 N 0.847
evm.TU.supercontig_30.133 Carica papaya evm.TU.supercontig_30.133 N 0.845
F775_02274 Aegilops tauschii F775_02274 N 0.750
fgenesh1_pm.C_scaffold_1002523 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002523 N 0.986
gene19989-v1.0-hybrid Fragaria vesca gene19989-v1.0-hybrid N 0.769
GLYMA05G26271 Glycine max GLYMA05G26271 N 0.806
GLYMA08G09191 Glycine max GLYMA08G09191 N 0.819
GLYMA09G05781 Glycine max GLYMA09G05781 N 0.833
GLYMA09G12330 Glycine max GLYMA09G12330 N 0.722
GLYMA13G23360 Glycine max GLYMA13G23360 N 0.708
GLYMA15G17040 Glycine max GLYMA15G17040 N 0.859
GLYMA15G23920 Glycine max GLYMA15G23920 N 0.708
GLYMA17G11470 Glycine max GLYMA17G11470 N 0.708
GRMZM2G017882 Zea mays GRMZM2G017882 N 0.806
GSMUA_Achr2G02580_001 Musa acuminata GSMUA_Achr2G02580_001 N 0.778
GSMUA_Achr6G20140_001 Musa acuminata GSMUA_Achr6G20140_001 N 0.764
GSMUA_Achr7G03600_001 Musa acuminata GSMUA_Achr7G03600_001 N 0.806
GSMUA_Achr8G33510_001 Musa acuminata GSMUA_Achr8G33510_001 N 0.806
GSMUA_Achr9G22490_001 Musa acuminata GSMUA_Achr9G22490_001 N 0.708
GSMUA_Achr9G30790_001 Musa acuminata GSMUA_Achr9G30790_001 N 0.806
GSMUA_AchrUn_randomG23740_001 Musa acuminata GSMUA_AchrUn_randomG23740_001 N 0.792
LjSGA_033751.1 Lotus japonicus LjSGA_033751.1 N 0.859
LPERR02G04770 Leersia perrieri LPERR02G04770 N 0.750
LPERR06G19930 Leersia perrieri LPERR06G19930 N 0.778
Lus10036226.g Linum usitatissimum Lus10036226.g N 0.757
Lus10038365.g Linum usitatissimum Lus10038365.g N 0.743
MDP0000197021 Malus domestica MDP0000197021 N 0.787
MDP0000891068 Malus domestica MDP0000891068 N 0.787
mgf021599m Mimulus guttatus mgf021599m N 0.705
MLOC_21744 Hordeum vulgare MLOC_21744 N 0.792
MTR_2g036170 Medicago truncatula MTR_2g036170 N 0.742
MTR_4g094680 Medicago truncatula MTR_4g094680 N 0.718
MTR_4g116300 Medicago truncatula MTR_4g116300 N 0.704
OB02G14750 Oryza brachyantha OB02G14750 N 0.819
OBART02G05520 Oryza barthii OBART02G05520 N 0.819
OBART06G24000 Oryza barthii OBART06G24000 N 0.778
OGLUM02G05380 Oryza glumaepatula OGLUM02G05380 N 0.819
OGLUM06G25260 Oryza glumaepatula OGLUM06G25260 N 0.775
OLONG_011712 Oryza longistaminata OLONG_011712 N 0.778
OLONG_022199 Oryza longistaminata OLONG_022199 N 0.741
OMERI06G23930 Oryza meridionalis OMERI06G23930 N 0.778
ONIVA02G05860 Oryza nivara ONIVA02G05860 N 0.819
ONIVA03G43780 Oryza nivara ONIVA03G43780 N 0.778
OPUNC02G04680 Oryza punctata OPUNC02G04680 N 0.819
OPUNC06G21750 Oryza punctata OPUNC06G21750 N 0.778
orange1.1g048158m.g Citrus sinensis orange1.1g048158m.g N 0.847
ORGLA06G0201700 Oryza glaberrima ORGLA06G0201700 N 0.778
ORUFI02G05620 Oryza rufipogon ORUFI02G05620 N 0.819
OS02G0172800 Oryza sativa OS02G0172800 N 0.819
OS06G0666100 Oryza sativa OS06G0666100 N 0.778
Pavir.Aa03378 Panicum virgatum Pavir.Aa03378 N 0.833
Pavir.Ab00578 Panicum virgatum Pavir.Ab00578 N 0.833
Pavir.Da00255 Panicum virgatum Pavir.Da00255 N 0.789
Pavir.Db00476 Panicum virgatum Pavir.Db00476 N 0.792
PDK_20s1316692g001 Phoenix dactylifera PDK_20s1316692g001 N 0.708
PDK_20s1530701g001 Phoenix dactylifera PDK_20s1530701g001 N 0.792
PK04104.1 Cannabis sativa PK04104.1 N 0.861
PK19037.1 Cannabis sativa PK19037.1 N 0.775
Pm010795 Prunus mume Pm010795 N 0.849
Pm027672 Prunus mume Pm027672 N 0.704
POPTR_0001s15920 Populus trichocarpa POPTR_0001s15920 N 0.875
POPTR_0003s07310 Populus trichocarpa POPTR_0003s07310 N 0.889
POPTR_0018s12380 Populus trichocarpa POPTR_0018s12380 N 0.704
PRUPE_ppa024886mg Prunus persica PRUPE_ppa024886mg N 0.849
SapurV1A.0104s0310 Salix purpurea SapurV1A.0104s0310 N 0.861
SapurV1A.0210s0200 Salix purpurea SapurV1A.0210s0200 N 0.847
SapurV1A.0306s0210 Salix purpurea SapurV1A.0306s0210 N 0.708
SapurV1A.2696s0020 Salix purpurea SapurV1A.2696s0020 N 0.722
Sb04g004830 Sorghum bicolor Sb04g004830 N 0.806
Sb10g026620 Sorghum bicolor Sb10g026620 N 0.778
Si007394m.g Setaria italica Si007394m.g N 0.769
Si018139m.g Setaria italica Si018139m.g N 0.833
Solyc02g068510.1 Solanum lycopersicum Solyc02g068510.1 N 0.806
Solyc07g007320.1 Solanum lycopersicum Solyc07g007320.1 N 0.736
TCM_006017 Theobroma cacao TCM_006017 N 0.889
Thhalv10009789m.g Eutrema salsugineum Thhalv10009789m.g N 1.000
Traes_6BS_4DA724E79 Triticum aestivum Traes_6BS_4DA724E79 N 0.806
Traes_6DS_CA4C01DEF Triticum aestivum Traes_6DS_CA4C01DEF N 0.792
Traes_7AL_5E9E6A334 Triticum aestivum Traes_7AL_5E9E6A334 N 0.806
Traes_7DL_B446D4CC6 Triticum aestivum Traes_7DL_B446D4CC6 N 0.792
TRIUR3_32978 Triticum urartu TRIUR3_32978 N 0.750
TRIUR3_33737 Triticum urartu TRIUR3_33737 N 0.806
VIT_01s0011g01410 Vitis vinifera VIT_01s0011g01410 N 0.847
VIT_11s0118g00600 Vitis vinifera VIT_11s0118g00600 N 0.708