evm.TU.supercontig_9.328 (Carica papaya)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 evm.TU.supercontig_9.328 T321130_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.857 0.857
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.816 0.816
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_9.328 RWP-RK 583 631

Links

Other RWP-RK family TFs
Other Carica papaya TFs

421 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra018490 Brassica rapa Bra018490 I 0.000
cassava19828.m1 Manihot esculenta cassava19828.m1 I 0.000
Ca_03592 Cicer arietinum Ca_03592 N 0.000
Ca_06495 Cicer arietinum Ca_06495 I 0.000
Ca_08369 Cicer arietinum Ca_08369 N 0.000
Ciclev10006519m.g Citrus clementina Ciclev10006519m.g I 0.000
Ciclev10013728m.g Citrus clementina Ciclev10013728m.g I 0.000
gene22916-v1.0-hybrid Fragaria vesca gene22916-v1.0-hybrid I 0.000
GLYMA10G28320 Glycine max GLYMA10G28320 N 0.000
LjSGA_024860.1 Lotus japonicus LjSGA_024860.1 I 0.000
LjSGA_102554.1 Lotus japonicus LjSGA_102554.1 I 0.000
LjSGA_147985.1 Lotus japonicus LjSGA_147985.1 I 0.000
LjT04G17.30.nc Lotus japonicus LjT04G17.30.nc N 0.000
MTR_1g077300 Medicago truncatula MTR_1g077300 N 0.000
MTR_1g077320 Medicago truncatula MTR_1g077320 N 0.000
MTR_1g077390 Medicago truncatula MTR_1g077390 N 0.000
MTR_1g084950 Medicago truncatula MTR_1g084950 N 0.000
MTR_1g090783 Medicago truncatula MTR_1g090783 N 0.000
MTR_4g028720 Medicago truncatula MTR_4g028720 N 0.000
MTR_7g011950 Medicago truncatula MTR_7g011950 N 0.000