Carubv10026434m.g (Capsella rubella)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Carubv10026434m.g T323424_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10026434m SBP 180 254
Carubv10026848m SBP 148 222

Links

Other SBP family TFs
Other Capsella rubella TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAB05479 Xenopus laevis AAB05479 I
AAEL006419 Aedes aegypti AAEL006419 I
AALB007981 Anopheles albimanus AALB007981 I
Aan_R011115 Calypte anna Aan_R011115 I
AARA009493 Anopheles arabiensis AARA009493 I
AATE009298 Anopheles atroparvus AATE009298 I
ACEP17167 Atta cephalotes ACEP17167 I
ACOM040639 Anopheles coluzzii ACOM040639 I
ACUA014515 Anopheles culicifacies ACUA014515 I
ACYPI001225 Acyrthosiphon pisum ACYPI001225 I
ACYPI009607 Acyrthosiphon pisum ACYPI009607 I
ADAC001896 Anopheles darlingi ADAC001896 I
ADIR011431 Anopheles dirus ADIR011431 I
AEPI005106 Anopheles epiroticus AEPI005106 I
AFAF012186 Anopheles farauti AFAF012186 I
Afo_R009248 Aptenodytes forsteri Afo_R009248 I
AFUN007280 Anopheles funestus AFUN007280 I
AGAP008935 Anopheles gambiae AGAP008935 I
Alligator_sinensis_CCG006987.1 Alligator sinensis Alligator_sinensis_CCG006987.1 I
AMAM009373 Anopheles maculatus AMAM009373 I
AMEC017285 Anopheles melas AMEC017285 I
AMEM004324 Anopheles merus AMEM004324 I
AMIN005880 Anopheles minimus AMIN005880 I
AQUA011533 Anopheles quadriannulatus AQUA011533 I
ASIS021327 Anopheles sinensis ASIS021327 I
ASTEI01929 Anopheles stephensi ASTEI01929 I
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 I
BGIBMGA003113 Bombyx mori BGIBMGA003113 I
Brh_R001357 Buceros rhinoceros Brh_R001357 I
BTMF_0000429201 Brugia timori BTMF_0000429201 I
CapteG179039 Capitella teleta CapteG179039 I
Cflo_01916--XP_397309.1_APIME Camponotus floridanus Cflo_01916--XP_397309.1_APIME I
CGI_10018383 Crassostrea gigas CGI_10018383 I
CLEC005205 Cimex lectularius CLEC005205 I
Cmyd_10010997 Chelonia mydas Cmyd_10010997 I
CPIJ004183 Culex quinquefasciatus CPIJ004183 I
CpipJ_CPIJ004183 Culex pipiens CpipJ_CPIJ004183 I
D915_08967 Fasciola hepatica D915_08967 I
D915_08968 Fasciola hepatica D915_08968 I
DAPPUDRAFT_98470 Daphnia pulex DAPPUDRAFT_98470 I
RBPJ Anolis carolinensis ENSACAG00000014578 I
ENSAMEG00000018082 Ailuropoda melanoleuca ENSAMEG00000018082 I
ENSAMXG00000010835 Astyanax mexicanus ENSAMXG00000010835 I
ENSAMXG00000011180 Astyanax mexicanus ENSAMXG00000011180 I
ENSAPLG00000007512 Anas platyrhynchos ENSAPLG00000007512 I
RBPJ Bos taurus ENSBTAG00000003602 I
ENSBTAP00000004696-D1 Bos grunniens ENSBTAP00000004696-D1 I
RBPJ Canis familiaris ENSCAFG00000016387 I
RBPJ Choloepus hoffmanni ENSCHOG00000001582 I
su(h) Ciona intestinalis ENSCING00000000838 I
RBPJ Callithrix jacchus ENSCJAG00000021033 I
RBPJ Cavia porcellus ENSCPOG00000007041 I
ENSCSAVG00000010744 Ciona savignyi ENSCSAVG00000010744 I
rbpja Danio rerio ENSDARG00000003398 I
rbpjb Danio rerio ENSDARG00000052091 I
RBPJ Dasypus novemcinctus ENSDNOG00000035383 I
Rbpj Dipodomys ordii ENSDORG00000006352 I
RBPJ Equus caballus ENSECAG00000019257 I
RBPJ Erinaceus europaeus ENSEEUG00000009686 I
ENSFALG00000009154 Ficedula albicollis ENSFALG00000009154 I
RBPJ Felis catus ENSFCAG00000030363 I
RBPJ Homo sapiens ENSG00000168214 D
rbpja Gasterosteus aculeatus ENSGACG00000015888 I
RBPJ Gallus gallus ENSGALG00000014365 I
RBPJ Gorilla gorilla ENSGGOG00000004582 I
ENSGMOG00000004951 Gadus morhua ENSGMOG00000004951 I
ENSGMOG00000006156 Gadus morhua ENSGMOG00000006156 I
ENSLACG00000007296 Latimeria chalumnae ENSLACG00000007296 I
RBPJ Loxodonta africana ENSLAFG00000000410 I
ENSLOCG00000009731 Lepisosteus oculatus ENSLOCG00000009731 I
RBPJ Meleagris gallopavo ENSMGAG00000012418 I
RBPJ Myotis lucifugus ENSMLUG00000017187 I
RBPJ Macaca mulatta ENSMMUG00000015828 I
RBPJ Monodelphis domestica ENSMODG00000000129 I
ENSMPUG00000016715 Mustela putorius furo ENSMPUG00000016715 I
Rbpj Mus musculus ENSMUSG00000039191 D
ENSNLEG00000016895 Nomascus leucogenys ENSNLEG00000016895 I
RBPJ Ornithorhynchus anatinus ENSOANG00000006699 I
ENSOARG00000008166 Ovis aries ENSOARG00000008166 I
RBPJ Oryctolagus cuniculus ENSOCUG00000013449 I
RBPJ Otolemur garnettii ENSOGAG00000007913 I
ENSONIG00000008873 Oreochromis niloticus ENSONIG00000008873 I
ENSONIG00000009281 Oreochromis niloticus ENSONIG00000009281 I
rbpja Oryzias latipes ENSORLG00000004882 I
ENSORLG00000006995 Oryzias latipes ENSORLG00000006995 I
ENSP00000354528 Macaca fascicularis ENSP00000354528 I
ENSPANG00000021176 Papio anubis ENSPANG00000021176 I
ENSPFOG00000012004 Poecilia formosa ENSPFOG00000012004 I
ENSPFOG00000016494 Poecilia formosa ENSPFOG00000016494 I
ENSPPYG00000014652 Pongo abelii ENSPPYG00000014652 I
ENSPPYG00000019874 Pongo abelii ENSPPYG00000019874 I
ENSPSIG00000016822 Pelodiscus sinensis ENSPSIG00000016822 I
RBPJ Pan troglodytes ENSPTRG00000015968 I
RBPJ Pteropus vampyrus ENSPVAG00000014199 I
Rbpj Rattus norvegicus ENSRNOG00000007797 I
Rbpj Rattus norvegicus ENSRNOG00000046327 I
ENSSHAG00000003329 Sarcophilus harrisii ENSSHAG00000003329 I
RBPJ Sus scrofa ENSSSCG00000022155 I
ENSSTOG00000004547 Ictidomys tridecemlineatus ENSSTOG00000004547 I
RBPJ Tupaia belangeri ENSTBEG00000002676 I
RBPJ Taeniopygia guttata ENSTGUG00000009245 I
RBPJ Tetraodon nigroviridis ENSTNIG00000012994 I
RBPJ Takifugu rubripes ENSTRUG00000014798 I
ENSTSYG00000001894 Tarsius syrichta ENSTSYG00000001894 I
RBPJ Tursiops truncatus ENSTTRG00000009022 I
RBPJ Vicugna pacos ENSVPAG00000003620 I
ENSVPAG00000005031 Vicugna pacos ENSVPAG00000005031 I
ENSXMAG00000009877 Xiphophorus maculatus ENSXMAG00000009877 I
ENSXMAG00000012207 Xiphophorus maculatus ENSXMAG00000012207 I
Su(H) Drosophila melanogaster FBgn0004837 D
Su(H) Drosophila simulans FBgn0027417 I
GF14905 Drosophila ananassae FBgn0091930 I
GG25142 Drosophila erecta FBgn0117267 I
GH10915 Drosophila grimshawi FBgn0118396 I
GI13259 Drosophila mojavensis FBgn0136016 I
GL26026 Drosophila persimilis FBgn0163608 I
GM15894 Drosophila sechellia FBgn0170810 I
GJ11880 Drosophila virilis FBgn0199134 I
GE20814 Drosophila yakuba FBgn0238107 I
GA25242 Drosophila pseudoobscura FBgn0246623 I
GA25243 Drosophila pseudoobscura FBgn0246624 I
fgenesh2_pg.scaffold_60000013 Branchiostoma floridae fgenesh2_pg.scaffold_60000013 I
fgenesh2_pg.scaffold_82000019 Branchiostoma floridae fgenesh2_pg.scaffold_82000019 I
GB45655 Apis mellifera GB45655 I
Gfo_R010339 Geospiza fortis Gfo_R010339 I
GPLIN_001569000 Globodera pallida GPLIN_001569000 I
HHAL001644-PA Halyomorpha halys HHAL001644-PA I
HMEL017244 Heliconius melpomene HMEL017244 I
Hsal_09918--XP_397309.1_APIME Harpegnathos saltator Hsal_09918--XP_397309.1_APIME I
ISCW010197 Ixodes scapularis ISCW010197 I
KGM_08407 Danaus plexippus KGM_08407 I
L798_15068 Zootermopsis nevadensis L798_15068 I
LCUP003485 Lucilia cuprina LCUP003485 I
LDEC018359 Leptinotarsa decemlineata LDEC018359 I
LLOJ000758 Lutzomyia longipalpis LLOJ000758 I
LLOJ000759 Lutzomyia longipalpis LLOJ000759 I
LotgiG159505 Lottia gigantea LotgiG159505 I
MDOA002342 Musca domestica MDOA002342 I
MESCA005881 Megaselia scalaris MESCA005881 I
Myotis_brandtii_RBPJ_10027377 Myotis brandtii Myotis_brandtii_RBPJ_10027377 I
NECAME_17145 Necator americanus NECAME_17145 I
NV17858 Nasonia vitripennis NV17858 I
NV17967 Nasonia vitripennis NV17967 I
Ocbimv22031643m.g Octopus bimaculoides Ocbimv22031643m.g I
Ogr02745 Ophisaurus gracilis Ogr02745 I
PHUM462870 Pediculus humanus PHUM462870 I
Pvit_10584 Pogona vitticeps Pvit_10584 I
Sakowv30027441m.g Saccoglossus kowalevskii Sakowv30027441m.g I
scaffold595-EXSNAP2012.9 Pristionchus exspectatus scaffold595-EXSNAP2012.9 I
SCUD_0000326701 Schistosoma curassoni SCUD_0000326701 I
SINV15808 Solenopsis invicta SINV15808 I
Sjc_0108400 Schistosoma japonicum Sjc_0108400 I
SMAR001432 Strigamia maritima SMAR001432 I
SMRZ_0000802101 Schistosoma margrebowiei SMRZ_0000802101 I
SMTD_0001089601 Schistosoma mattheei SMTD_0001089601 I
SMUV_0001013801 Syphacia muris SMUV_0001013801 I
Tal_R001466 Tyto alba Tal_R001466 I
TC014468 Tribolium castaneum TC014468 I
tetur04g02700 Tetranychus urticae tetur04g02700 I
tetur04g02730 Tetranychus urticae tetur04g02730 I
tetur11g00180 Tetranychus urticae tetur11g00180 I
TRE_0000568701 Trichobilharzia regenti TRE_0000568701 I
rbpj Xenopus tropicalis XB-GENE-490756 I
rbpj.S Xenopus laevis XB-GENE-865998 I
YQE_03219 Dendroctonus ponderosae YQE_03219 I