AACERI_AaceriAGL073CA (Saccharomycetaceae sp ashbya aceri)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 AACERI_AaceriAGL073CA T326244_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IXR1
M08429_2.00 		Saccharomyces cerevisiae
CMCCGCTYCCGGYTT
AARCCGGRAGCGGKG		 ChIP-chip
Mathelier et al.(2014)
MA0323.1 		0.639 0.735
IXR1
M11345_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$IXR1_01 		0.639 0.735
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AGO13797 Sox 209 277
AGO13797 Sox 282 348

Links

Other Sox family TFs
Other Saccharomycetaceae sp ashbya aceri TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
13553_YKL032C Saccharomyces mikatae 13553_YKL032C I 0.639
13606_Multiple Saccharomyces paradoxus 13606_Multiple I 0.521
14658_YKL032C Saccharomyces bayanus 14658_YKL032C I 0.639
AGOS_AGL073CA Ashbya gossypii AGOS_AGL073CA I 0.741
CAGL0L02013g Candida glabrata CAGL0L02013g I 0.629
Ecym_7252 Eremothecium cymbalariae Ecym_7252 I 0.732
KAFR_0J00330 Kazachstania africana KAFR_0J00330 I 0.664
KLLA0_E18481g Kluyveromyces lactis KLLA0_E18481g I 0.612
KLTH0D06908g Lachancea thermotolerans KLTH0D06908g I 0.650
KLTH0D06908g Kluyveromyces thermotolerans KLTH0D06908g I 0.650
KNAG_0A07060 Kazachstania naganishii KNAG_0A07060 I 0.655
Kpol_348p11 Vanderwaltozyma polyspora Kpol_348p11 I 0.619
Kwal_8043 Kluyveromyces waltii Kwal_8043 I 0.649
LALA0_S02e01376g Lachancea lanzarotensis LALA0_S02e01376g I 0.638
NCAS_0A04790 Naumovozyma castellii NCAS_0A04790 I 0.635
NDAI_0K01850 Naumovozyma dairenensis NDAI_0K01850 I 0.635
SAKL0A09548g Lachancea kluyveri SAKL0A09548g I 0.596
SU7_2018 Saccharomyces arboricola SU7_2018 I 0.639
TBLA_0G02260 Tetrapisispora blattae TBLA_0G02260 I 0.649
TDEL_0A03100 Torulaspora delbrueckii TDEL_0A03100 I 0.655
TPHA_0G03540 Tetrapisispora phaffii TPHA_0G03540 I 0.619
IXR1 Saccharomyces cerevisiae YKL032C D 0.639
ZBAI_03824 Zygosaccharomyces bailii ZBAI_03824 I 0.658
ZBAI_09505 Zygosaccharomyces bailii ZBAI_09505 I 0.658
ZYRO0B02068g Zygosaccharomyces rouxii ZYRO0B02068g I 0.639