CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HETIRDRAFT_460226
(
Heterobasidion irregulare
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
HETIRDRAFT_460226
T330594_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ETW77744
Sox
123
143
VKRPENAFILFRRKCCEDRNS
ETW77744
Sox
156
207
KASAPTKKQRQADLSKAISREWKALTAEERQYWEELAKEKKKEHEQLHPNYV
Links
Other
Sox
family TFs
Other
Heterobasidion irregulare
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1Q1_02593
Trichosporon asahii
A1Q1_02593
N
0.549
AWRI1499_2837
Brettanomyces bruxellensis
AWRI1499_2837
N
0.494
BGIBMGA006156
Bombyx mori
BGIBMGA006156
N
0.472
BN7_5943
Wickerhamomyces ciferrii
BN7_5943
N
0.452
CC1G_07855
Coprinopsis cinerea
CC1G_07855
N
0.486
estExt_Genewise1.C_120062
Heterobasidion annosum
estExt_Genewise1.C_120062
N
0.741
EVEC_0001251901
Enterobius vermicularis
EVEC_0001251901
N
0.461
fgenesh1_pg.C_scaffold_11000089
Sporobolomyces roseus
fgenesh1_pg.C_scaffold_11000089
N
0.565
GLOINDRAFT_9339
Rhizophagus irregularis
GLOINDRAFT_9339
N
0.538
HelroG178674
Helobdella robusta
HelroG178674
N
0.420
HPODL_02662
Ogataea parapolymorpha
HPODL_02662
N
0.489
JAAARDRAFT_460099
Jaapia argillacea
JAAARDRAFT_460099
N
0.482
K437DRAFT_266676
Tilletiaria anomala
K437DRAFT_266676
N
0.536
K437DRAFT_66818
Tilletiaria anomala
K437DRAFT_66818
N
0.494
KLLA0_B11495g
Kluyveromyces lactis
KLLA0_B11495g
N
0.434
KUCA_T00004799001
Kuraishia capsulata
KUCA_T00004799001
N
0.475
Kwal_9519
Kluyveromyces waltii
Kwal_9519
N
0.475
LALA0_S01e08702g
Lachancea lanzarotensis
LALA0_S01e08702g
N
0.500
LALA0_S10e00254g
Lachancea lanzarotensis
LALA0_S10e00254g
N
0.508
M378DRAFT_41557
Amanita muscaria
M378DRAFT_41557
N
0.468
M407DRAFT_45069
Tulasnella calospora
M407DRAFT_45069
N
0.513
MCOS_0000664501
Mesocestoides corti
MCOS_0000664501
N
0.424
Moror_8439
Moniliophthora roreri
Moror_8439
N
0.558
MPER_12197
Moniliophthora perniciosa
MPER_12197
N
0.580
MVLG_01553
Microbotryum violaceum
MVLG_01553
N
0.563
PAS_chr1-1_0442
Komagataella pastoris
PAS_chr1-1_0442
N
0.488
PAS_chr3_1149
Komagataella pastoris
PAS_chr3_1149
N
0.486
Phatr3_J33840
Phaeodactylum tricornutum
Phatr3_J33840
N
0.430
RHTO_04537
Rhodosporidium toruloides
RHTO_04537
N
0.565
SAKL0C03872g
Lachancea kluyveri
SAKL0C03872g
N
0.557
SAKL0C03916g
Lachancea kluyveri
SAKL0C03916g
N
0.557
SAKL0C10648g
Lachancea kluyveri
SAKL0C10648g
N
0.560
SAKL0D09922g
Lachancea kluyveri
SAKL0D09922g
N
0.529
SAKL0H00726g
Lachancea kluyveri
SAKL0H00726g
N
0.460
SCHCODRAFT_110960
Schizophyllum commune
SCHCODRAFT_110960
N
0.466
sr12520
Sporisorium reilianum
sr12520
N
0.499
Thaps25909
Thalassiosira pseudonana
Thaps25909
N
0.473
TSTA_110260
Talaromyces stipitatus
TSTA_110260
N
0.469
UCREL1_5722
Eutypa lata
UCREL1_5722
N
0.428
UM01457
Ustilago maydis
UM01457
N
0.442
XP_002490100.1
Pichia pastoris
XP_002490100.1
N
0.488
XP_002492281.1
Pichia pastoris
XP_002492281.1
N
0.486