CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PYU1_G009481
(
Pythium ultimum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
PYU1_G009481
T332332_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PYU1_T009499
Sox
34
102
PKRALSAFMFFSNDIRDTVKREMPELEFLQISSEIGRRWKEISEEDRRPYDELAAADKKRYLEEKEDYV
PYU1_T009499
Sox
122
190
PKRALSAYFFFCNEIRDSVRSQNPNMKITEIATLLAAKWRELPEKKRVKYQKMHEEAKVKYQSAMDDYN
Links
Other
Sox
family TFs
Other
Pythium ultimum
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB010330
Anopheles albimanus
AALB010330
I
Aan_R013029
Calypte anna
Aan_R013029
I
AARA002865
Anopheles arabiensis
AARA002865
I
AATE014419
Anopheles atroparvus
AATE014419
I
ACEP22947
Atta cephalotes
ACEP22947
I
ACHR004409
Anopheles christyi
ACHR004409
I
ACOM041529
Anopheles coluzzii
ACOM041529
I
ACUA010350
Anopheles culicifacies
ACUA010350
I
ACYPI007722
Acyrthosiphon pisum
ACYPI007722
I
ADAC003479
Anopheles darlingi
ADAC003479
I
AEPI003553
Anopheles epiroticus
AEPI003553
I
AFAF000230
Anopheles farauti
AFAF000230
I
Afo_R003215
Aptenodytes forsteri
Afo_R003215
I
Afo_R012023
Aptenodytes forsteri
Afo_R012023
I
AFUN004906
Anopheles funestus
AFUN004906
I
Alligator_sinensis_CCG000393.1
Alligator sinensis
Alligator_sinensis_CCG000393.1
I
Alligator_sinensis_CCG017609.1
Alligator sinensis
Alligator_sinensis_CCG017609.1
I
AMEC016105
Anopheles melas
AMEC016105
I
AMEM017983
Anopheles merus
AMEM017983
I
AQUA007473
Anopheles quadriannulatus
AQUA007473
I
ASIS004664
Anopheles sinensis
ASIS004664
I
ASTEI06456
Anopheles stephensi
ASTEI06456
I
BGIBMGA011565
Bombyx mori
BGIBMGA011565
I
BGLB009291
Biomphalaria glabrata
BGLB009291
I
Brh_R001594
Buceros rhinoceros
Brh_R001594
I
Brh_R003197
Buceros rhinoceros
Brh_R003197
I
BTMF_0000130101
Brugia timori
BTMF_0000130101
I
Cflo_00077--XP_394171.3_APIME
Camponotus floridanus
Cflo_00077--XP_394171.3_APIME
I
Cmyd_10009821
Chelonia mydas
Cmyd_10009821
I
csin100403
Clonorchis sinensis
csin100403
N
DILT_0000082701
Diphyllobothrium latum
DILT_0000082701
I
ENSACAG00000003097
Anolis carolinensis
ENSACAG00000003097
I
ENSACAG00000010823
Anolis carolinensis
ENSACAG00000010823
I
ENSAMEG00000006442
Ailuropoda melanoleuca
ENSAMEG00000006442
I
ENSAMXG00000001200
Astyanax mexicanus
ENSAMXG00000001200
I
ENSAPLG00000009260
Anas platyrhynchos
ENSAPLG00000009260
I
EBF3
Bos taurus
ENSBTAG00000008272
I
ENSBTAP00000053340-D1
Bos grunniens
ENSBTAP00000053340-D1
I
EBF3
Canis familiaris
ENSCAFG00000013267
I
EBF1
Callithrix jacchus
ENSCJAG00000019016
I
EBF2
Callithrix jacchus
ENSCJAG00000019921
I
EBF4
Callithrix jacchus
ENSCJAG00000021027
I
ENSCSAG00000010520
Chlorocebus sabaeus
ENSCSAG00000010520
I
ENSCSAVG00000000458
Ciona savignyi
ENSCSAVG00000000458
I
EBF3
Dasypus novemcinctus
ENSDNOG00000002588
I
EBF1
Dasypus novemcinctus
ENSDNOG00000035396
I
EBF1
Equus caballus
ENSECAG00000007964
I
ENSFALG00000011234
Ficedula albicollis
ENSFALG00000011234
I
ENSFCAG00000027202
Felis catus
ENSFCAG00000027202
I
EBF1
Homo sapiens
ENSG00000164330
D
ebf2
Gasterosteus aculeatus
ENSGACG00000008451
I
EBF1
Gasterosteus aculeatus
ENSGACG00000020458
I
EBF2
Gallus gallus
ENSGALG00000000242
I
EBF1
Gorilla gorilla
ENSGGOG00000000033
I
ENSGMOG00000012325
Gadus morhua
ENSGMOG00000012325
I
ENSLACG00000005494
Latimeria chalumnae
ENSLACG00000005494
I
ENSLACG00000017271
Latimeria chalumnae
ENSLACG00000017271
I
EBF1
Loxodonta africana
ENSLAFG00000017522
I
EBF2
Meleagris gallopavo
ENSMGAG00000000791
I
ENSMLUG00000004376
Myotis lucifugus
ENSMLUG00000004376
I
EBF3
Myotis lucifugus
ENSMLUG00000005478
I
EBF2
Myotis lucifugus
ENSMLUG00000011509
I
EBF4
Macaca mulatta
ENSMMUG00000021331
I
EBF1
Macaca mulatta
ENSMMUG00000021696
I
ENSMMUP00000028570
Macaca fascicularis
ENSMMUP00000028570
I
ENSMPUG00000002449
Mustela putorius furo
ENSMPUG00000002449
I
ENSMPUG00000013414
Mustela putorius furo
ENSMPUG00000013414
I
Ebf4
Mus musculus
ENSMUSG00000053552
D
ENSOANG00000004212
Ornithorhynchus anatinus
ENSOANG00000004212
I
ENSOARG00000012836
Ovis aries
ENSOARG00000012836
I
EBF1
Otolemur garnettii
ENSOGAG00000013992
I
ENSP00000347463-D1
Bos grunniens
ENSP00000347463-D1
I
ENSPANG00000010656
Papio anubis
ENSPANG00000010656
I
ENSPFOG00000002559
Poecilia formosa
ENSPFOG00000002559
I
ENSPMAG00000003287
Petromyzon marinus
ENSPMAG00000003287
I
ENSPMAG00000004238
Petromyzon marinus
ENSPMAG00000004238
I
ENSPSIG00000005604
Pelodiscus sinensis
ENSPSIG00000005604
I
Ebf1
Rattus norvegicus
ENSRNOG00000028845
I
ENSSHAG00000000353
Sarcophilus harrisii
ENSSHAG00000000353
I
ENSSHAG00000018391
Sarcophilus harrisii
ENSSHAG00000018391
I
EBF1
Sus scrofa
ENSSSCG00000017046
I
ENSSTOG00000007966
Ictidomys tridecemlineatus
ENSSTOG00000007966
I
ENSSTOG00000011505
Ictidomys tridecemlineatus
ENSSTOG00000011505
I
ENSSTOG00000016352
Ictidomys tridecemlineatus
ENSSTOG00000016352
I
EBF2
Taeniopygia guttata
ENSTGUG00000004267
I
EBF1
Tetraodon nigroviridis
ENSTNIG00000016148
I
ENSXMAG00000006633
Xiphophorus maculatus
ENSXMAG00000006633
I
ENSXMAG00000010351
Xiphophorus maculatus
ENSXMAG00000010351
I
estExt_gwp.C_3380002
Branchiostoma floridae
estExt_gwp.C_3380002
I
estExt_gwp.C_3810003
Branchiostoma floridae
estExt_gwp.C_3810003
I
GH12956
Drosophila grimshawi
FBgn0120434
I
Gfo_R013267
Geospiza fortis
Gfo_R013267
I
GPLIN_000159400
Globodera pallida
GPLIN_000159400
I
Hba_09581
Heterorhabditis bacteriophora
Hba_09581
I
HelroG112029
Helobdella robusta
HelroG112029
I
HMEL014948
Heliconius melpomene
HMEL014948
I
Hsal_03263--XP_394171.3_APIME
Harpegnathos saltator
Hsal_03263--XP_394171.3_APIME
I
LCUP013862
Lucilia cuprina
LCUP013862
I
LotgiG225788
Lottia gigantea
LotgiG225788
I
MCINX016126
Melitaea cinxia
MCINX016126
I
MDOA011385
Musca domestica
MDOA011385
I
Myotis_brandtii_Ebf1_10034833
Myotis brandtii
Myotis_brandtii_Ebf1_10034833
I
Myotis_brandtii_EBF2_10005813
Myotis brandtii
Myotis_brandtii_EBF2_10005813
I
Myotis_brandtii_Ebf3_10024819
Myotis brandtii
Myotis_brandtii_Ebf3_10024819
I
nDi.2.2.2.g04990
Dirofilaria immitis
nDi.2.2.2.g04990
I
nRc.2.0.1.g06532
Romanomermis culicivorax
nRc.2.0.1.g06532
I
nRc.2.0.1.g14013
Romanomermis culicivorax
nRc.2.0.1.g14013
I
Ocbimv22038949m.g
Octopus bimaculoides
Ocbimv22038949m.g
I
OESDEN_10293
Oesophagostomum dentatum
OESDEN_10293
I
OFLC_0000294401
Onchocerca flexuosa
OFLC_0000294401
I
Ogr00083
Ophisaurus gracilis
Ogr00083
I
Ppa-unc-3
Pristionchus pacificus
PPA20518
I
Pvit_11383
Pogona vitticeps
Pvit_11383
I
Pvit_12046
Pogona vitticeps
Pvit_12046
I
Pvit_12666
Pogona vitticeps
Pvit_12666
I
Sakowv30011033m.g
Saccoglossus kowalevskii
Sakowv30011033m.g
I
scaffold24-EXSNAP2012.58
Pristionchus exspectatus
scaffold24-EXSNAP2012.58
I
SMU15024001
Schmidtea mediterranea
SMU15024001
I
T265_13606
Opisthorchis viverrini
T265_13606
N
Tal_R004164
Tyto alba
Tal_R004164
I
ebf2
Xenopus tropicalis
XB-GENE-971136
I
ebf2.S
Xenopus laevis
XB-GENE-971141
I
YQE_08127
Dendroctonus ponderosae
YQE_08127
I