IXR1 (Saccharomyces cerevisiae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 YKL032C T333323_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IXR1
M08429_2.00		 Saccharomyces cerevisiae
CMCCGCTYCCGGYTT
AARCCGGRAGCGGKG		 ChIP-chip
Mathelier et al.(2014)
MA0323.1		 (Direct) (Direct)
IXR1
M11345_2.00		 Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$IXR1_01		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
YKL032C Sox 361 429
YKL032C Sox 434 500

Links

Other Sox family TFs
Other Saccharomyces cerevisiae TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
13553_YKL032C Saccharomyces mikatae 13553_YKL032C I 0.741
13606_Multiple Saccharomyces paradoxus 13606_Multiple I 0.623
14658_YKL032C Saccharomyces bayanus 14658_YKL032C I 0.741
AACERI_AaceriAGL073CA Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGL073CA I 0.639
AGOS_AGL073CA Ashbya gossypii AGOS_AGL073CA I 0.639
CAGL0L02013g Candida glabrata CAGL0L02013g I 0.692
Ecym_7252 Eremothecium cymbalariae Ecym_7252 I 0.630
KAFR_0J00330 Kazachstania africana KAFR_0J00330 I 0.685
KLLA0_E18481g Kluyveromyces lactis KLLA0_E18481g I 0.580
KLTH0D06908g Lachancea thermotolerans KLTH0D06908g I 0.614
KLTH0D06908g Kluyveromyces thermotolerans KLTH0D06908g I 0.614
KNAG_0A07060 Kazachstania naganishii KNAG_0A07060 I 0.694
Kpol_348p11 Vanderwaltozyma polyspora Kpol_348p11 I 0.680
Kwal_8043 Kluyveromyces waltii Kwal_8043 I 0.619
LALA0_S02e01376g Lachancea lanzarotensis LALA0_S02e01376g I 0.608
NCAS_0A04790 Naumovozyma castellii NCAS_0A04790 I 0.706
NDAI_0K01850 Naumovozyma dairenensis NDAI_0K01850 I 0.709
SAKL0A09548g Lachancea kluyveri SAKL0A09548g I 0.566
SU7_2018 Saccharomyces arboricola SU7_2018 I 0.741
TBLA_0G02260 Tetrapisispora blattae TBLA_0G02260 I 0.677
TDEL_0A03100 Torulaspora delbrueckii TDEL_0A03100 I 0.701
TPHA_0G03540 Tetrapisispora phaffii TPHA_0G03540 I 0.680
ZBAI_03824 Zygosaccharomyces bailii ZBAI_03824 I 0.700
ZBAI_09505 Zygosaccharomyces bailii ZBAI_09505 I 0.700
ZYRO0B02068g Zygosaccharomyces rouxii ZYRO0B02068g I 0.688