CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sjc_0119940
(
Schistosoma japonicum
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Sjc_0119940
T334987_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPRT0000011233
Sox
8
70
LRELFAQHIRRNVLRVFSDASNSVISQQLGDLWRTVPRSCRNQYDDEANRLVKIHQIEFPNYK
Links
Other
Sox
family TFs
Other
Schistosoma japonicum
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_00545
Schistosoma haematobium
A_00545
N
0.650
csin105999
Clonorchis sinensis
csin105999
I
0.573
D915_01276
Fasciola hepatica
D915_01276
N
0.675
D915_11240
Fasciola hepatica
D915_11240
N
0.513
DILT_0001026601
Diphyllobothrium latum
DILT_0001026601
I
0.500
DILT_0001316601
Diphyllobothrium latum
DILT_0001316601
N
0.563
DILT_0001785501
Diphyllobothrium latum
DILT_0001785501
N
0.517
ECANG7_06280
Echinococcus canadensis
ECANG7_06280
I
0.461
ECANG7_10853
Echinococcus canadensis
ECANG7_10853
I
0.471
ECPE_0001194001
Echinostoma caproni
ECPE_0001194001
N
0.682
EmuJ_000232900
Echinococcus multilocularis
EmuJ_000232900
I
0.461
HDID_0000236901
Hymenolepis diminuta
HDID_0000236901
I
0.466
HDID_0000312901
Hymenolepis diminuta
HDID_0000312901
N
0.470
HmN_000208300
Hymenolepis microstoma
HmN_000208300
I
0.472
HmN_000874900
Hymenolepis microstoma
HmN_000874900
I
0.466
HNAJ_0000300301
Hymenolepis nana
HNAJ_0000300301
I
0.472
HNAJ_0001105001
Hymenolepis nana
HNAJ_0001105001
I
0.466
KLTH0F13926g
Kluyveromyces thermotolerans
KLTH0F13926g
I
0.422
KLTH0F13926g
Lachancea thermotolerans
KLTH0F13926g
I
0.422
Kwal_21061
Kluyveromyces waltii
Kwal_21061
I
0.422
MCOS_0000670801
Mesocestoides corti
MCOS_0000670801
I
0.455
MCOS_0000919201
Mesocestoides corti
MCOS_0000919201
N
0.580
PXEA_0000763901
Protopolystoma xenopodis
PXEA_0000763901
N
0.482
SCUD_0001126301
Schistosoma curassoni
SCUD_0001126301
N
0.690
Sjc_0084710
Schistosoma japonicum
Sjc_0084710
N
0.533
Smp_076600
Schistosoma mansoni
Smp_076600
I
0.416
SMRZ_0002061501
Schistosoma margrebowiei
SMRZ_0002061501
N
0.690
SMTD_0000090701
Schistosoma mattheei
SMTD_0000090701
N
0.525
SMTD_0001685201
Schistosoma mattheei
SMTD_0001685201
N
0.690
SMU15001429
Schmidtea mediterranea
SMU15001429
I
0.426
SMU15001430
Schmidtea mediterranea
SMU15001430
I
0.426
SMU15015648
Schmidtea mediterranea
SMU15015648
I
0.458
SPER_0000914201
Spirometra erinaceieuropaei
SPER_0000914201
N
0.517
SPER_0001384501
Spirometra erinaceieuropaei
SPER_0001384501
I
0.454
SPER_0001708101
Spirometra erinaceieuropaei
SPER_0001708101
N
0.493
SPER_0001952401
Spirometra erinaceieuropaei
SPER_0001952401
N
0.493
SSLN_0000478001
Schistocephalus solidus
SSLN_0000478001
I
0.500
SSLN_0000478501
Schistocephalus solidus
SSLN_0000478501
I
0.468
SSLN_0001637801
Schistocephalus solidus
SSLN_0001637801
I
0.454
T265_06704
Opisthorchis viverrini
T265_06704
I
0.573
TASK_0000873701
Taenia asiatica
TASK_0000873701
I
0.461
TASK_0001001001
Taenia asiatica
TASK_0001001001
I
0.471
TRIREDRAFT_54007
Trichoderma reesei
TRIREDRAFT_54007
N
0.464
TsM_000188900
Taenia solium
TsM_000188900
I
0.471
TsM_000714900
Taenia solium
TsM_000714900
I
0.461
TTAC_0000092501
Hydatigera taeniaeformis
TTAC_0000092501
I
0.461
TTAC_0000238201
Hydatigera taeniaeformis
TTAC_0000238201
I
0.471
TTAC_0001064401
Hydatigera taeniaeformis
TTAC_0001064401
N
0.465