HPBE_0001808001 (Heligmosomoides bakeri)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 HPBE_0001808001 T336467_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
HPBE_0001808001-mRNA-1 Sox 34 90
HPBE_0001808001-mRNA-1 Sox 129 198

Links

Other Sox family TFs
Other Heligmosomoides bakeri TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAB39329 Xenopus laevis AAB39329 I
Aan_R002236 Calypte anna Aan_R002236 I
Aan_R005227 Calypte anna Aan_R005227 I
Aan_R005610 Calypte anna Aan_R005610 I
ACEP23519 Atta cephalotes ACEP23519 I
ACEP23524 Atta cephalotes ACEP23524 I
Afo_R003117 Aptenodytes forsteri Afo_R003117 I
Afo_R015053 Aptenodytes forsteri Afo_R015053 I
Alligator_sinensis_CCG004626.1 Alligator sinensis Alligator_sinensis_CCG004626.1 I
Alligator_sinensis_CCG012577.1 Alligator sinensis Alligator_sinensis_CCG012577.1 I
Aqu1.229822 Amphimedon queenslandica Aqu1.229822 I
BGIBMGA010481 Bombyx mori BGIBMGA010481 I
Brh_R001114 Buceros rhinoceros Brh_R001114 I
Brh_R001115 Buceros rhinoceros Brh_R001115 I
Brh_R009512 Buceros rhinoceros Brh_R009512 I
CapteG167863 Capitella teleta CapteG167863 I
CGI_10014747 Crassostrea gigas CGI_10014747 I
CGI_10017370 Crassostrea gigas CGI_10017370 I
Cmyd_10013581 Chelonia mydas Cmyd_10013581 I
D918_06928 Trichuris suis D918_06928 I
D918_09504 Trichuris suis D918_09504 I
DAPPUDRAFT_314805 Daphnia pulex DAPPUDRAFT_314805 I
SMAD9 Anolis carolinensis ENSACAG00000004463 I
ENSAMEG00000003318 Ailuropoda melanoleuca ENSAMEG00000003318 I
ENSAMXG00000002880 Astyanax mexicanus ENSAMXG00000002880 I
ENSAPLG00000003593 Anas platyrhynchos ENSAPLG00000003593 I
ENSAPLG00000004964 Anas platyrhynchos ENSAPLG00000004964 I
ENSAPLG00000007006 Anas platyrhynchos ENSAPLG00000007006 I
ENSAPLG00000009135 Anas platyrhynchos ENSAPLG00000009135 I
ENSAPLG00000011496 Anas platyrhynchos ENSAPLG00000011496 I
ENSBTAP00000003668-D4 Bos grunniens ENSBTAP00000003668-D4 I
SMAD3 Canis familiaris ENSCAFG00000017388 I
SMAD3 Choloepus hoffmanni ENSCHOG00000001562 I
SMAD3 Callithrix jacchus ENSCJAG00000002088 I
SMAD3 Cavia porcellus ENSCPOG00000021314 I
ENSCSAG00000013275 Chlorocebus sabaeus ENSCSAG00000013275 I
ENSCSAVG00000004749 Ciona savignyi ENSCSAVG00000004749 I
smad3b Danio rerio ENSDARG00000010207 I
smad3a Danio rerio ENSDARG00000036096 I
SMAD3 Dasypus novemcinctus ENSDNOG00000044090 I
SMAD9 Dasypus novemcinctus ENSDNOG00000048385 I
SMAD3 Echinops telfairi ENSETEG00000003356 I
ENSETEG00000017446 Echinops telfairi ENSETEG00000017446 I
ENSFALG00000008280 Ficedula albicollis ENSFALG00000008280 I
ENSFALG00000012861 Ficedula albicollis ENSFALG00000012861 I
SMAD3 Homo sapiens ENSG00000166949 D
smad3b Gasterosteus aculeatus ENSGACG00000005092 I
ENSGACG00000017820 Gasterosteus aculeatus ENSGACG00000017820 I
ENSGALG00000007870 Gallus gallus ENSGALG00000007870 I
ENSGALG00000014184 Gallus gallus ENSGALG00000014184 I
SMAD9 Gallus gallus ENSGALG00000017050 I
ENSGMOG00000001314 Gadus morhua ENSGMOG00000001314 I
ENSGMOG00000008364 Gadus morhua ENSGMOG00000008364 I
ENSLACG00000010552 Latimeria chalumnae ENSLACG00000010552 I
ENSLACG00000011178 Latimeria chalumnae ENSLACG00000011178 I
ENSLOCG00000013897 Lepisosteus oculatus ENSLOCG00000013897 I
ENSMEUG00000007556 Macropus eugenii ENSMEUG00000007556 I
ENSMGAG00000001351 Meleagris gallopavo ENSMGAG00000001351 I
SMAD3 Meleagris gallopavo ENSMGAG00000009879 I
SMAD9 Meleagris gallopavo ENSMGAG00000015060 I
SMAD3 Microcebus murinus ENSMICG00000006119 I
SMAD2 Microcebus murinus ENSMICG00000007882 I
SMAD9 Myotis lucifugus ENSMLUG00000006399 I
SMAD3 Macaca mulatta ENSMMUG00000015455 I
SMAD3 Monodelphis domestica ENSMODG00000009609 I
SMAD9 Monodelphis domestica ENSMODG00000010017 I
Smad3 Mus musculus ENSMUSG00000032402 D
ENSNLEG00000012983 Nomascus leucogenys ENSNLEG00000012983 I
SMAD5 Ornithorhynchus anatinus ENSOANG00000009906 I
ENSOARG00000018267 Ovis aries ENSOARG00000018267 I
ENSOARG00000018276 Ovis aries ENSOARG00000018276 I
SMAD3 Otolemur garnettii ENSOGAG00000014217 I
ENSONIG00000004109 Oreochromis niloticus ENSONIG00000004109 I
ENSONIG00000013271 Oreochromis niloticus ENSONIG00000013271 I
ENSONIG00000015464 Oreochromis niloticus ENSONIG00000015464 I
SMAD1 Ochotona princeps ENSOPRG00000012775 I
SMAD3 Ochotona princeps ENSOPRG00000014996 I
smad3a Oryzias latipes ENSORLG00000002207 I
smad9 Oryzias latipes ENSORLG00000003956 I
smad3b Oryzias latipes ENSORLG00000006803 I
ENSORLG00000011834 Oryzias latipes ENSORLG00000011834 I
ENSP00000332973 Macaca fascicularis ENSP00000332973 I
ENSP00000332973-D1 Bos grunniens ENSP00000332973-D1 I
ENSPANG00000016627 Papio anubis ENSPANG00000016627 I
SMAD9 Procavia capensis ENSPCAG00000002604 I
SMAD3 Procavia capensis ENSPCAG00000008103 I
ENSPFOG00000002285 Poecilia formosa ENSPFOG00000002285 I
ENSPFOG00000004885 Poecilia formosa ENSPFOG00000004885 I
ENSPFOG00000006336 Poecilia formosa ENSPFOG00000006336 I
ENSPFOG00000008802 Poecilia formosa ENSPFOG00000008802 I
ENSPFOG00000015910 Poecilia formosa ENSPFOG00000015910 I
ENSPFOG00000015984 Poecilia formosa ENSPFOG00000015984 I
ENSPMAG00000000489 Petromyzon marinus ENSPMAG00000000489 I
ENSPMAG00000004234 Petromyzon marinus ENSPMAG00000004234 I
ENSPMAG00000009833 Petromyzon marinus ENSPMAG00000009833 I
ENSPPYG00000006583 Pongo abelii ENSPPYG00000006583 I
ENSPSIG00000002483 Pelodiscus sinensis ENSPSIG00000002483 I
ENSPSIG00000010579 Pelodiscus sinensis ENSPSIG00000010579 I
SMAD3 Pan troglodytes ENSPTRG00000007199 I
SMAD3 Pteropus vampyrus ENSPVAG00000002626 I
Smad3 Rattus norvegicus ENSRNOG00000008620 I
SMAD2 Sorex araneus ENSSARG00000003487 I
ENSSHAG00000001186 Sarcophilus harrisii ENSSHAG00000001186 I
ENSSHAG00000012543 Sarcophilus harrisii ENSSHAG00000012543 I
ENSSTOG00000003788 Ictidomys tridecemlineatus ENSSTOG00000003788 I
ENSSTOG00000010286 Ictidomys tridecemlineatus ENSSTOG00000010286 I
ENSSTOG00000010836 Ictidomys tridecemlineatus ENSSTOG00000010836 I
SMAD3 Taeniopygia guttata ENSTGUG00000009470 I
ENSTNIG00000004827 Tetraodon nigroviridis ENSTNIG00000004827 I
smad3b Tetraodon nigroviridis ENSTNIG00000008432 I
smad3a Tetraodon nigroviridis ENSTNIG00000009546 I
smad3b Takifugu rubripes ENSTRUG00000014802 I
smad3a Takifugu rubripes ENSTRUG00000016858 I
ENSTSYG00000005021 Tarsius syrichta ENSTSYG00000005021 I
ENSXMAG00000002377 Xiphophorus maculatus ENSXMAG00000002377 I
ENSXMAG00000003553 Xiphophorus maculatus ENSXMAG00000003553 I
ENSXMAG00000004505 Xiphophorus maculatus ENSXMAG00000004505 I
ENSXMAG00000008595 Xiphophorus maculatus ENSXMAG00000008595 I
estExt_fgenesh2_pg.C_1720042 Branchiostoma floridae estExt_fgenesh2_pg.C_1720042 I
estExt_gwp.C_540260 Branchiostoma floridae estExt_gwp.C_540260 I
Mad Drosophila melanogaster FBgn0011648 D
GF20577 Drosophila ananassae FBgn0097583 I
GG24457 Drosophila erecta FBgn0116589 I
GH10284 Drosophila grimshawi FBgn0117765 I
GI17981 Drosophila mojavensis FBgn0140721 I
GL26531 Drosophila persimilis FBgn0164113 I
GM18164 Drosophila sechellia FBgn0173071 I
GD22774 Drosophila simulans FBgn0194168 I
GJ19553 Drosophila virilis FBgn0206695 I
GK18268 Drosophila willistoni FBgn0220267 I
GE14935 Drosophila yakuba FBgn0232525 I
GA28973 Drosophila pseudoobscura FBgn0250331 I
Gfo_R000026 Geospiza fortis Gfo_R000026 I
Gfo_R005758 Geospiza fortis Gfo_R005758 I
Gfo_R005908 Geospiza fortis Gfo_R005908 I
Gfo_R012055 Geospiza fortis Gfo_R012055 I
HelroG185435 Helobdella robusta HelroG185435 I
HelroG186716 Helobdella robusta HelroG186716 I
ISCW001846 Ixodes scapularis ISCW001846 I
L798_03803 Zootermopsis nevadensis L798_03803 I
L798_14024 Zootermopsis nevadensis L798_14024 I
LotgiG189014 Lottia gigantea LotgiG189014 I
ML011743a Mnemiopsis leidyi ML011743a I
Myotis_brandtii_Smad3_10022298 Myotis brandtii Myotis_brandtii_Smad3_10022298 I
Myotis_brandtii_SMAD9_10010468 Myotis brandtii Myotis_brandtii_SMAD9_10010468 I
NEMVEDRAFT_v1g168041 Nematostella vectensis NEMVEDRAFT_v1g168041 I
NEMVEDRAFT_v1g228395 Nematostella vectensis NEMVEDRAFT_v1g228395 I
NV10880 Nasonia vitripennis NV10880 I
PHUM033930 Pediculus humanus PHUM033930 I
PPAI005080 Phlebotomus papatasi PPAI005080 I
Pvit_04328 Pogona vitticeps Pvit_04328 I
Pvit_04529 Pogona vitticeps Pvit_04529 I
Sakowv30032201m.g Saccoglossus kowalevskii Sakowv30032201m.g I
SINV22799 Solenopsis invicta SINV22799 I
SMAR008230 Strigamia maritima SMAR008230 I
SMAR012602 Strigamia maritima SMAR012602 I
SPU_017642 Strongylocentrotus purpuratus SPU_017642 I
Tal_R000062 Tyto alba Tal_R000062 I
Tal_R001210 Tyto alba Tal_R001210 I
Tal_R004657 Tyto alba Tal_R004657 I
Tal_R011237 Tyto alba Tal_R011237 I
tetur04g09040 Tetranychus urticae tetur04g09040 I
TMUE_s0005013500 Trichuris muris TMUE_s0005013500 I
TriadG49742 Trichoplax adhaerens TriadG49742 I
TsM_000781600 Taenia solium TsM_000781600 I
TTRE_0000192701 Trichuris trichiura TTRE_0000192701 I
TTRE_0000645601 Trichuris trichiura TTRE_0000645601 I
smad3 Xenopus tropicalis XB-GENE-481992 I
smad3.L Xenopus laevis XB-GENE-864816 I
smad2.S Xenopus laevis XB-GENE-864923 I
XP_002157279.1 Hydra magnipapillata XP_002157279.1 I