nLs.2.1.2.g01047 (Litomosoides sigmodontis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 nLs.2.1.2.g01047 T336703_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t01047-RA Sox 73 141

Links

Other Sox family TFs
Other Litomosoides sigmodontis TFs

152 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL010903 Aedes aegypti AAEL010903 N 0.478
AAH41216 Xenopus laevis AAH41216 N 0.483
ACAC_0000207501 Angiostrongylus cantonensis ACAC_0000207501 N 0.633
ACEP21543 Atta cephalotes ACEP21543 N 0.507
ACYPI008028 Acyrthosiphon pisum ACYPI008028 N 0.460
ALUE_0000987201 Ascaris lumbricoides ALUE_0000987201 N 0.702
ANCCAN_03785 Ancylostoma caninum ANCCAN_03785 N 0.627
ANCCAN_09575 Ancylostoma caninum ANCCAN_09575 N 0.627
ANCCEY_02937 Ancylostoma ceylanicum ANCCEY_02937 N 0.627
ANCDUO_12071 Ancylostoma duodenale ANCDUO_12071 N 0.627
ASIM_0000973401 Anisakis simplex ASIM_0000973401 N 0.507
ASIM_0001578601 Anisakis simplex ASIM_0001578601 N 0.696
ASIM_0001639001 Anisakis simplex ASIM_0001639001 N 0.696
ASU_02248 Ascaris suum ASU_02248 N 0.702
BGIBMGA009228 Bombyx mori BGIBMGA009228 N 0.000
Bm12451 Brugia malayi Bm12451 N 0.545
Bm7076 Brugia malayi Bm7076 N 0.741
CapteG156119 Capitella teleta CapteG156119 N 0.465
CBG09815 Caenorhabditis briggsae CBG09815 N 0.523
CBN09141 Caenorhabditis brenneri CBN09141 N 0.492
Cflo_00654--XP_395543.3_APIME Camponotus floridanus Cflo_00654--XP_395543.3_APIME N 0.507
CJA12494 Caenorhabditis japonica CJA12494 N 0.486
CLEC001104 Cimex lectularius CLEC001104 N 0.461
CLEC009203 Cimex lectularius CLEC009203 N 0.487
CPIJ007400 Culex quinquefasciatus CPIJ007400 N 0.478
CPIJ018416 Culex quinquefasciatus CPIJ018416 N 0.478
CpipJ_CPIJ007400 Culex pipiens CpipJ_CPIJ007400 N 0.478
CpipJ_CPIJ018416 Culex pipiens CpipJ_CPIJ018416 N 0.478
CRE25200 Caenorhabditis remanei CRE25200 N 0.492
DAPPUDRAFT_305068 Daphnia pulex DAPPUDRAFT_305068 N 0.499
DME_0000063901 Dracunculus medinensis DME_0000063901 N 0.728
EEL_0000522201 Elaeophora elaphi EEL_0000522201 N 0.741
ENSCING00000007774 Ciona intestinalis ENSCING00000007774 N 0.461
ENSCJAG00000006608 Callithrix jacchus ENSCJAG00000006608 N 0.476
ENSFCAG00000026463 Felis catus ENSFCAG00000026463 N 0.443
SMARCE1 Gasterosteus aculeatus ENSGACG00000018114 N 0.470
ENSGMOG00000002045 Gadus morhua ENSGMOG00000002045 N 0.492
ENSOCUG00000016848 Oryctolagus cuniculus ENSOCUG00000016848 N 0.476
ENSONIG00000006293 Oreochromis niloticus ENSONIG00000006293 N 0.492
smarce1 Oryzias latipes ENSORLG00000018629 N 0.492
ENSPFOG00000009890 Poecilia formosa ENSPFOG00000009890 N 0.492
ENSPFOG00000019561 Poecilia formosa ENSPFOG00000019561 N 0.492
AC123471.1 Rattus norvegicus ENSRNOG00000018377 N 0.472
smarce1 Tetraodon nigroviridis ENSTNIG00000014009 N 0.492
smarce1 Takifugu rubripes ENSTRUG00000012899 N 0.492
ENSXMAG00000002642 Xiphophorus maculatus ENSXMAG00000002642 N 0.492
EVEC_0000378901 Enterobius vermicularis EVEC_0000378901 N 0.650
dalao Drosophila melanogaster FBgn0030093 N 0.425
GF19131 Drosophila ananassae FBgn0096142 N 0.421
GG18291 Drosophila erecta FBgn0110507 N 0.425
GH12291 Drosophila grimshawi FBgn0119770 N 0.421
GI15536 Drosophila mojavensis FBgn0138285 N 0.000
GL26801 Drosophila persimilis FBgn0164382 N 0.453
GM13722 Drosophila sechellia FBgn0168653 N 0.425
GD16931 Drosophila simulans FBgn0188511 N 0.425
GJ14880 Drosophila virilis FBgn0202084 N 0.000
GK25765 Drosophila willistoni FBgn0227724 N 0.421
GE15824 Drosophila yakuba FBgn0233388 N 0.425
GA26137 Drosophila pseudoobscura FBgn0247513 N 0.453
fgenesh2_pg.scaffold_137000001 Branchiostoma floridae fgenesh2_pg.scaffold_137000001 N 0.484
GB50847 Apis mellifera GB50847 N 0.507
GPLIN_000239300 Globodera pallida GPLIN_000239300 N 0.587
Hba_20635 Heterorhabditis bacteriophora Hba_20635 N 0.549
HCOI00022200 Haemonchus contortus HCOI00022200 N 0.627
HCOI00569400 Haemonchus contortus HCOI00569400 N 0.627
HelroG188630 Helobdella robusta HelroG188630 N 0.458
HHAL002088-PA Halyomorpha halys HHAL002088-PA N 0.507
HHAL007378-PA Halyomorpha halys HHAL007378-PA N 0.484
HPBE_0000083501 Heligmosomoides bakeri HPBE_0000083501 N 0.627
HPLM_0001658301 Haemonchus placei HPLM_0001658301 N 0.627
Hsal_01302--XP_395543.3_APIME Harpegnathos saltator Hsal_01302--XP_395543.3_APIME N 0.507
ISCW021016 Ixodes scapularis ISCW021016 N 0.489
L596_g22461 Steinernema carpocapsae L596_g22461 N 0.582
L798_00593 Zootermopsis nevadensis L798_00593 N 0.507
L889_g3706 Steinernema feltiae L889_g3706 N 0.479
L892_g30100 Steinernema scapterisci L892_g30100 N 0.582
L898_g375 Steinernema monticolum L898_g375 N 0.578
LCUP013669 Lucilia cuprina LCUP013669 N 0.447
LDEC003494 Leptinotarsa decemlineata LDEC003494 N 0.507
LLOJ006040 Lutzomyia longipalpis LLOJ006040 N 0.465
LOAG_01279 Loa loa LOAG_01279 N 0.741
LotgiG111061 Lottia gigantea LotgiG111061 N 0.451
maker-nMf.1.1.scaf01126-augustus-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf01126-augustus-gene-0.13 N 0.502
MDOA009352 Musca domestica MDOA009352 N 0.418
MhA1_Contig1809.frz3.gene8 Meloidogyne hapla MhA1_Contig1809.frz3.gene8 N 0.578
Minc14081 Meloidogyne incognita Minc14081 N 0.502
ML45008a Mnemiopsis leidyi ML45008a N 0.470
nAv.1.0.1.g03900 Acanthocheilonema viteae nAv.1.0.1.g03900 N 0.741
nDi.2.2.2.g02092 Dirofilaria immitis nDi.2.2.2.g02092 N 0.735
NECAME_16117 Necator americanus NECAME_16117 N 0.627
NEMVEDRAFT_v1g177453 Nematostella vectensis NEMVEDRAFT_v1g177453 N 0.485
nOo.2.0.1.g01360 Onchocerca ochengi nOo.2.0.1.g01360 N 0.741
NV11999 Nasonia vitripennis NV11999 N 0.510
OESDEN_12607 Oesophagostomum dentatum OESDEN_12607 N 0.627
OESDEN_21929 Oesophagostomum dentatum OESDEN_21929 N 0.627
OFLC_0001285101 Onchocerca flexuosa OFLC_0001285101 N 0.741
PEQ_0000805501 Parascaris equorum PEQ_0000805501 N 0.566
PPA02543 Pristionchus pacificus PPA02543 N 0.557
PPAI002058 Phlebotomus papatasi PPAI002058 N 0.501
Sakowv30017721m.g Saccoglossus kowalevskii Sakowv30017721m.g N 0.462
scaffold237-EXSNAP2012.36 Pristionchus exspectatus scaffold237-EXSNAP2012.36 N 0.557
SMAR004982 Strigamia maritima SMAR004982 N 0.488
snap_masked-nMf.1.1.scaf27159-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf27159-processed-gene-0.2 N 0.502
SPU_009282 Strongylocentrotus purpuratus SPU_009282 N 0.466
SVUK_0000819801 Strongylus vulgaris SVUK_0000819801 N 0.627
TC007745 Tribolium castaneum TC007745 N 0.507
TCLT_0000145301 Thelazia callipaeda TCLT_0000145301 N 0.741
TCNE_0001003101 Toxocara canis TCNE_0001003101 N 0.507
TELCIR_14354 Teladorsagia circumcincta TELCIR_14354 N 0.627
TriadG53566 Trichoplax adhaerens TriadG53566 N 0.000
swsn-3 Caenorhabditis elegans WBGene00022182 N 0.530
WBGene00245293 Onchocerca volvulus WBGene00245293 N 0.741
WUBG_07283 Wuchereria bancrofti WUBG_07283 N 0.741
YQE_02381 Dendroctonus ponderosae YQE_02381 N 0.507