MTR_7g009730 (Medicago truncatula)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 MTR_7g009730 T353305_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY6
M07377_2.00 		Arabidopsis thaliana
DNNNHNDHNHNRGTCAACG
CGTTGACYNDNDHNDNNNH		 Dap-seq
OMalley et al.(2016)
WRKY6_col_a 		0.873 0.864
WRKY6
M07378_2.00 		Arabidopsis thaliana
NNHNWRGTCAACKNH
DNMGTTGACYWNDNN		 Dap-seq
OMalley et al.(2016)
WRKY6_colamp_a 		0.873 0.864
WRKY31
M07408_2.00 		Arabidopsis thaliana
NNNNHNNNNNDRGTCAACG
CGTTGACYHNNNNNDNNNN		 Dap-seq
OMalley et al.(2016)
WRKY31_col_a 		0.871 0.864
WRKY31
M07409_2.00 		Arabidopsis thaliana
NHWRGTCAACKNH
DNMGTTGACYWDN		 Dap-seq
OMalley et al.(2016)
WRKY31_colamp_a 		0.871 0.864
WRKY42
M07404_2.00 		Arabidopsis thaliana
NDWRGTCAACDNNNNDNNHNN
NNDNNHNNNNHGTTGACYWHN		 Dap-seq
OMalley et al.(2016)
WRKY42_col_a 		0.869 0.847
WRKY42
M07405_2.00 		Arabidopsis thaliana
HNDNNNWRGTCAACKNHNDD
HHNDNMGTTGACYWNNNHND		 Dap-seq
OMalley et al.(2016)
WRKY42_colamp_a 		0.869 0.847
WRKY47
M00732_2.00 		Arabidopsis thaliana
NNRGTCAACKN
NMGTTGACYNN		 PBM
Chang et al.(2013)
pTH7913 		0.867 0.847
WRKY47
M07402_2.00 		Arabidopsis thaliana
WRGTCAAMGNHVDK
MHBDNCKTTGACYW		 Dap-seq
OMalley et al.(2016)
WRKY47_col_a 		0.867 0.847
WRKY47
M07403_2.00 		Arabidopsis thaliana
NNNHWRGTCAACKNHNNNN
NNNNDNMGTTGACYWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY47_colamp_a 		0.867 0.847
WRKY60
M02551_2.00 		Arabidopsis thaliana
NYGGTCAAMNN
NNKTTGACCRN		 PBM
Weirauch et al.(2014)
pTH7379 		0.820 0.644
WRKY40
M02548_2.00 		Arabidopsis thaliana
NRGTCAWN
NWTGACYN		 PBM
Weirauch et al.(2014)
pTH8398 		0.820 0.610
WRKY40
M07379_2.00 		Arabidopsis thaliana
NNNAAAGTCAAVR
YBTTGACTTTNNN		 Dap-seq
OMalley et al.(2016)
WRKY40_colamp_a 		0.820 0.610
WRKY40
M07380_2.00 		Arabidopsis thaliana
NNVAAAGTCAAVRNH
DNYBTTGACTTTBNN		 Dap-seq
OMalley et al.(2016)
WRKY40_col 		0.820 0.610
WRKY40
M08180_2.00 		Arabidopsis thaliana
NNAGTCAANN
NNTTGACTNN		 ChIP-seq
Mathelier et al.(2014)
MA1085.2 		0.820 0.610
WRKY18
M02560_2.00 		Arabidopsis thaliana
NNRGTCAANN
NNTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7360 		0.816 0.661
WRKY18
M00900_2.00 		Arabidopsis thaliana
NVGTCNN
NNGACBN		 PBM
Franco-Zorrilla et al.(2014)
WRKY18 		0.816 0.661
WRKY18
M07416_2.00 		Arabidopsis thaliana
NNHRGTCAASR
YSTTGACYDNN		 Dap-seq
OMalley et al.(2016)
WRKY18_col_a 		0.816 0.661
WRKY18
M07417_2.00 		Arabidopsis thaliana
NNNHWAGTCAANR
YNTTGACTWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY18_colamp_a 		0.816 0.661
WRKY18
M11465_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRKY18_Q2 		0.816 0.661
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES77361 WRKY 219 277

Links

Other WRKY family TFs
Other Medicago truncatula TFs

773 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27763.m000042 Ricinus communis 27763.m000042 I
28226.m000839 Ricinus communis 28226.m000839 I
30128.m008730 Ricinus communis 30128.m008730 I
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I
Aquca_015_00085 Aquilegia coerulea Aquca_015_00085 I
Aquca_015_00088 Aquilegia coerulea Aquca_015_00088 I
Aquca_015_00090 Aquilegia coerulea Aquca_015_00090 I
Aquca_047_00006 Aquilegia coerulea Aquca_047_00006 I
MYB75 Arabidopsis thaliana AT1G56650 I
MYB113 Arabidopsis thaliana AT1G66370 D
MYB114 Arabidopsis thaliana AT1G66380 I
MYB90 Arabidopsis thaliana AT1G66390 I
Bo00835s060 Brassica oleracea Bo00835s060 I
Bo6g099880 Brassica oleracea Bo6g099880 I
Bo6g100940 Brassica oleracea Bo6g100940 I
Bra001917 Brassica rapa Bra001917 I
Bra004162 Brassica rapa Bra004162 I
Bra039763 Brassica rapa Bra039763 I
Cagra.0463s0006 Capsella grandiflora Cagra.0463s0006 I
Cagra.0463s0007 Capsella grandiflora Cagra.0463s0007 I
Cagra.0463s0008 Capsella grandiflora Cagra.0463s0008 I
Cagra.2400s0001 Capsella grandiflora Cagra.2400s0001 I
Cagra.2629s0007 Capsella grandiflora Cagra.2629s0007 I
Carubv10020856m.g Capsella rubella Carubv10020856m.g I
Carubv10020888m.g Capsella rubella Carubv10020888m.g I
Carubv10022245m.g Capsella rubella Carubv10022245m.g N
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I
Ca_03154 Cicer arietinum Ca_03154 I
Ca_19630 Cicer arietinum Ca_19630 I
Ca_22078 Cicer arietinum Ca_22078 I
chr1.CM0141.350.nd Lotus japonicus chr1.CM0141.350.nd I
chr1.LjT44L17.240.nd Lotus japonicus chr1.LjT44L17.240.nd I
Ciclev10009286m.g Citrus clementina Ciclev10009286m.g I
Ciclev10013455m.g Citrus clementina Ciclev10013455m.g I
Cucsa.277570 Cucumis sativus Cucsa.277570 I
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I
Eucgr.F02842 Eucalyptus grandis Eucgr.F02842 I
Eucgr.H04157 Eucalyptus grandis Eucgr.H04157 I
Eucgr.J01553 Eucalyptus grandis Eucgr.J01553 I
Eucgr.J01555 Eucalyptus grandis Eucgr.J01555 I
Eucgr.J01569 Eucalyptus grandis Eucgr.J01569 I
Eucgr.J01573 Eucalyptus grandis Eucgr.J01573 I
Eucgr.J01574 Eucalyptus grandis Eucgr.J01574 I
Eucgr.J01576 Eucalyptus grandis Eucgr.J01576 I
Eucgr.J01578 Eucalyptus grandis Eucgr.J01578 I
Eucgr.J01580 Eucalyptus grandis Eucgr.J01580 I
Eucgr.J01586 Eucalyptus grandis Eucgr.J01586 I
Eucgr.J02817 Eucalyptus grandis Eucgr.J02817 I
evm.TU.contig_42663.2 Carica papaya evm.TU.contig_42663.2 I
evm.TU.supercontig_116.38 Carica papaya evm.TU.supercontig_116.38 I
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I
evm.TU.supercontig_2742.1 Carica papaya evm.TU.supercontig_2742.1 I
evm.TU.supercontig_51.67 Carica papaya evm.TU.supercontig_51.67 I
fgenesh1_pg.C_scaffold_2000950 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000950 I
PAP1 Arabidopsis lyrata fgenesh2_kg.1__4777__AT1G56650.1 I
MYB113 Arabidopsis lyrata fgenesh2_kg.2__869__AT1G66370.1 I
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I
gene15392-v1.0-hybrid Fragaria vesca gene15392-v1.0-hybrid I
gene31413-v1.0-hybrid Fragaria vesca gene31413-v1.0-hybrid I
GLYMA07G04240 Glycine max GLYMA07G04240 I
GLYMA07G16980 Glycine max GLYMA07G16980 I
GLYMA09G36966 Glycine max GLYMA09G36966 I
GLYMA09G36983 Glycine max GLYMA09G36983 I
GLYMA09G37010 Glycine max GLYMA09G37010 I
GLYMA16G00931 Glycine max GLYMA16G00931 I
GLYMA18G41520 Glycine max GLYMA18G41520 I
GLYMA18G49670 Glycine max GLYMA18G49670 I
GLYMA18G49690 Glycine max GLYMA18G49690 I
GLYMA19G02980 Glycine max GLYMA19G02980 I
GLYMA20G32500 Glycine max GLYMA20G32500 I
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I
Gorai.001G020400 Gossypium raimondii Gorai.001G020400 I
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I
Gorai.001G087200 Gossypium raimondii Gorai.001G087200 I
Gorai.001G087400 Gossypium raimondii Gorai.001G087400 I
Gorai.007G268800 Gossypium raimondii Gorai.007G268800 I
Gorai.013G118300 Gossypium raimondii Gorai.013G118300 I
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I
GSMUA_Achr7G18560_001 Musa acuminata GSMUA_Achr7G18560_001 I
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I
LjSGA_029658.1 Lotus japonicus LjSGA_029658.1 I
Lus10003277.g Linum usitatissimum Lus10003277.g I
Lus10009129.g Linum usitatissimum Lus10009129.g I
Lus10009130.g Linum usitatissimum Lus10009130.g I
Lus10028513.g Linum usitatissimum Lus10028513.g I
Lus10028514.g Linum usitatissimum Lus10028514.g I
Lus10042522.g Linum usitatissimum Lus10042522.g I
MDP0000031172 Malus domestica MDP0000031172 I
MDP0000192051 Malus domestica MDP0000192051 I
MDP0000210851 Malus domestica MDP0000210851 I
MDP0000478453 Malus domestica MDP0000478453 I
mgf019036m Mimulus guttatus mgf019036m N
mgf019317m Mimulus guttatus mgf019317m I
mgf022565m Mimulus guttatus mgf022565m I
MTR_0001s0360 Medicago truncatula MTR_0001s0360 I
MTR_0193s0090 Medicago truncatula MTR_0193s0090 I
MTR_0197s0010 Medicago truncatula MTR_0197s0010 I
MTR_0247s0040 Medicago truncatula MTR_0247s0040 I
MTR_4g125520 Medicago truncatula MTR_4g125520 I
MTR_5g078800 Medicago truncatula MTR_5g078800 I
MTR_5g078860 Medicago truncatula MTR_5g078860 I
MTR_5g078910 Medicago truncatula MTR_5g078910 I
MTR_5g078930 Medicago truncatula MTR_5g078930 I
MTR_5g078950 Medicago truncatula MTR_5g078950 I
MTR_5g079120 Medicago truncatula MTR_5g079120 I
MTR_5g079220 Medicago truncatula MTR_5g079220 I
MTR_5g079290 Medicago truncatula MTR_5g079290 I
MTR_7g017260 Medicago truncatula MTR_7g017260 I
MTR_8g060940 Medicago truncatula MTR_8g060940 I
orange1.1g025602m.g Citrus sinensis orange1.1g025602m.g I
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I
PDK_20s1447601g001 Phoenix dactylifera PDK_20s1447601g001 I
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I
PK05760.1 Cannabis sativa PK05760.1 I
PK17827.1 Cannabis sativa PK17827.1 I
Pm005570 Prunus mume Pm005570 I
Pm005571 Prunus mume Pm005571 I
Pm005572 Prunus mume Pm005572 I
Pm025429 Prunus mume Pm025429 I
Pm027047 Prunus mume Pm027047 I
Pm029440 Prunus mume Pm029440 I
Pm029442 Prunus mume Pm029442 I
Pm029445 Prunus mume Pm029445 I
Pm031337 Prunus mume Pm031337 I
POPTR_0005s14450 Populus trichocarpa POPTR_0005s14450 I
POPTR_0005s14460 Populus trichocarpa POPTR_0005s14460 I
POPTR_0005s14470 Populus trichocarpa POPTR_0005s14470 I
POPTR_0005s14480 Populus trichocarpa POPTR_0005s14480 I
POPTR_0005s14490 Populus trichocarpa POPTR_0005s14490 I
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I
PRUPE_ppa010069mg Prunus persica PRUPE_ppa010069mg I
PRUPE_ppa016711mg Prunus persica PRUPE_ppa016711mg I
PRUPE_ppa020385mg Prunus persica PRUPE_ppa020385mg I
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I
PRUPE_ppa023768mg Prunus persica PRUPE_ppa023768mg I
PRUPE_ppa023789mg Prunus persica PRUPE_ppa023789mg I
PRUPE_ppa023812mg Prunus persica PRUPE_ppa023812mg I
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I
PRUPE_ppa026640mg Prunus persica PRUPE_ppa026640mg I
SapurV1A.0230s0240 Salix purpurea SapurV1A.0230s0240 I
SapurV1A.0230s0250 Salix purpurea SapurV1A.0230s0250 I
SapurV1A.0230s0260 Salix purpurea SapurV1A.0230s0260 I
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I
Sb01g032770 Sorghum bicolor Sb01g032770 I
scaffold_201356.1 Arabidopsis lyrata scaffold_201356.1 I
scaffold_201357.1 Arabidopsis lyrata scaffold_201357.1 I
ATMYB90 Arabidopsis lyrata scaffold_201358.1 I
Si038905m.g Setaria italica Si038905m.g I
Solyc10g086250.1 Solanum lycopersicum Solyc10g086250.1 I
Solyc10g086260.1 Solanum lycopersicum Solyc10g086260.1 I
Solyc10g086270.1 Solanum lycopersicum Solyc10g086270.1 I
Solyc10g086290.1 Solanum lycopersicum Solyc10g086290.1 I
TCM_004509 Theobroma cacao TCM_004509 I
TCM_019192 Theobroma cacao TCM_019192 I
TCM_026054 Theobroma cacao TCM_026054 I
TCM_037376 Theobroma cacao TCM_037376 I
TCM_037559 Theobroma cacao TCM_037559 I
Thhalv10019041m.g Eutrema salsugineum Thhalv10019041m.g I
VIT_02s0033g00390 Vitis vinifera VIT_02s0033g00390 I
VIT_02s0033g00400 Vitis vinifera VIT_02s0033g00400 I
VIT_02s0033g00410 Vitis vinifera VIT_02s0033g00410 I
VIT_02s0033g00430 Vitis vinifera VIT_02s0033g00430 I
VIT_02s0033g00450 Vitis vinifera VIT_02s0033g00450 I
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I
VIT_14s0006g01280 Vitis vinifera VIT_14s0006g01280 I
VIT_14s0006g01290 Vitis vinifera VIT_14s0006g01290 I
VIT_14s0006g01340 Vitis vinifera VIT_14s0006g01340 I