Thhalv10004616m.g (Eutrema salsugineum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Thhalv10004616m.g T357004_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY30
M02563_2.00 		Arabidopsis thaliana
RGTCAACNNN
NNNGTTGACY		 PBM
Weirauch et al.(2014)
pTH7611 		0.888 0.966
WRKY30
M07422_2.00 		Arabidopsis thaliana
DAAGTCAACGN
NCGTTGACTTH		 Dap-seq
OMalley et al.(2016)
WRKY30_col_a 		0.888 0.966
WRKY30
M07423_2.00 		Arabidopsis thaliana
NNAAGTCAACGNH
DNCGTTGACTTNN		 Dap-seq
OMalley et al.(2016)
WRKY30_colamp_a 		0.888 0.966
WRKY53
M01090_2.00 		Arabidopsis thaliana
RGTCAACNN
NNGTTGACY		 PBM
Sullivan et al.(2014)
pTH8245 		0.853 0.746
WRKY55
M07392_2.00 		Arabidopsis thaliana
HWAGTCAACGNH
DNCGTTGACTWD		 Dap-seq
OMalley et al.(2016)
WRKY55_col_a 		0.823 0.610
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.813 0.610
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10004616m WRKY 121 181

Links

Other WRKY family TFs
Other Eutrema salsugineum TFs

444 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_002_00170 Aquilegia coerulea Aquca_002_00170 I
Aquca_025_00333 Aquilegia coerulea Aquca_025_00333 I
GL1 Arabidopsis thaliana AT3G27920 I
WER Arabidopsis thaliana AT5G14750 D
MYB23 Arabidopsis thaliana AT5G40330 D
Bo2g012170 Brassica oleracea Bo2g012170 I
Bo9g165670 Brassica oleracea Bo9g165670 I
Bostr.1460s0063 Boechera stricta Bostr.1460s0063 I
Bostr.2902s0211 Boechera stricta Bostr.2902s0211 I
Bostr.7200s0005 Boechera stricta Bostr.7200s0005 I
Bra008740 Brassica rapa Bra008740 I
Bra025311 Brassica rapa Bra025311 I
Bra025589 Brassica rapa Bra025589 I
Cagra.3160s0003 Capsella grandiflora Cagra.3160s0003 I
Cagra.3166s0078 Capsella grandiflora Cagra.3166s0078 I
Cagra.4961s0006 Capsella grandiflora Cagra.4961s0006 I
Carubv10001990m.g Capsella rubella Carubv10001990m.g I
Carubv10005698m.g Capsella rubella Carubv10005698m.g I
Carubv10018791m.g Capsella rubella Carubv10018791m.g I
cassava26193.m1 Manihot esculenta cassava26193.m1 I
cassava27350.m1 Manihot esculenta cassava27350.m1 I
Ciclev10032713m.g Citrus clementina Ciclev10032713m.g I
Cla011528 Citrullus lanatus Cla011528 I
Eucgr.B00373 Eucalyptus grandis Eucgr.B00373 I
Eucgr.B03324 Eucalyptus grandis Eucgr.B03324 N
Eucgr.I01791 Eucalyptus grandis Eucgr.I01791 I
Eucgr.J02212 Eucalyptus grandis Eucgr.J02212 I
evm.TU.supercontig_124.57 Carica papaya evm.TU.supercontig_124.57 I
GL1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5000559 I
WER Arabidopsis lyrata fgenesh2_kg.6__1454__AT5G14750.1 I
gene32181-v1.0-hybrid Fragaria vesca gene32181-v1.0-hybrid I
Gorai.007G001800 Gossypium raimondii Gorai.007G001800 I
GSMUA_Achr10G19970_001 Musa acuminata GSMUA_Achr10G19970_001 I
MDP0000164048 Malus domestica MDP0000164048 I
MDP0000537324 Malus domestica MDP0000537324 I
MDP0000578193 Malus domestica MDP0000578193 I
MDP0000650225 Malus domestica MDP0000650225 I
orange1.1g047269m.g Citrus sinensis orange1.1g047269m.g I
Pm006678 Prunus mume Pm006678 I
Pm024725 Prunus mume Pm024725 I
POPTR_0012s08190 Populus trichocarpa POPTR_0012s08190 I
PRUPE_ppa010908mg Prunus persica PRUPE_ppa010908mg I
PRUPE_ppa014884mg Prunus persica PRUPE_ppa014884mg I
SapurV1A.1178s0050 Salix purpurea SapurV1A.1178s0050 I
TCM_010360 Theobroma cacao TCM_010360 I
TCM_012057 Theobroma cacao TCM_012057 I
TCM_016886 Theobroma cacao TCM_016886 I
Thhalv10005428m.g Eutrema salsugineum Thhalv10005428m.g I
Thhalv10014715m.g Eutrema salsugineum Thhalv10014715m.g I
Thhalv10028340m.g Eutrema salsugineum Thhalv10028340m.g I
VIT_01s0127g00730 Vitis vinifera VIT_01s0127g00730 I
VIT_14s0066g01220 Vitis vinifera VIT_14s0066g01220 I
VIT_17s0000g08480 Vitis vinifera VIT_17s0000g08480 I