GLRG_07904 (Colletotrichum graminicola)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 GLRG_07904 T369634_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANIA_00568
M01347_2.00 		Aspergillus nidulans
NRDWBSCCGV
BCGGSVWHYN		 PBM
Lambert et al.(2019)
pEX0204 		0.598 0.641
ANIA_03986
M01364_2.00 		Aspergillus nidulans
YCGGCGWW
WWCGCCGR		 PBM
Lambert et al.(2019)
pEX0417 		0.555 0.590
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFQ32760 Zinc cluster 19 57

Links

Other Zinc cluster family TFs
Other Colletotrichum graminicola TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29709.m001180 Ricinus communis 29709.m001180 N 0.000
AMTR_s00002p00164190 Amborella trichopoda AMTR_s00002p00164190 N 0.000
AT2G44730 Arabidopsis thaliana AT2G44730 N 0.000
Bo3g037360 Brassica oleracea Bo3g037360 N 0.000
Bo4g023990 Brassica oleracea Bo4g023990 N 0.000
Bostr.25993s0300 Boechera stricta Bostr.25993s0300 N 0.000
Bra000360 Brassica rapa Bra000360 N 0.000
BRADI3G38680 Brachypodium distachyon BRADI3G38680 N 0.000
Cagra.0239s0022 Capsella grandiflora Cagra.0239s0022 N 0.000
Carubv10025047m.g Capsella rubella Carubv10025047m.g N 0.000
cassava12982.valid.m1 Manihot esculenta cassava12982.valid.m1 N 0.000
Ca_02143 Cicer arietinum Ca_02143 N 0.000
Ca_06067 Cicer arietinum Ca_06067 N 0.000
Ca_06795 Cicer arietinum Ca_06795 N 0.000
chr4.CM0739.40.nd Lotus japonicus chr4.CM0739.40.nd N 0.000
Ciclev10020863m.g Citrus clementina Ciclev10020863m.g N 0.000
Cla015186 Citrullus lanatus Cla015186 N 0.000
Cla021714 Citrullus lanatus Cla021714 N 0.000
Cucsa.078220 Cucumis sativus Cucsa.078220 N 0.000
Cucsa.256710 Cucumis sativus Cucsa.256710 N 0.000
fgenesh2_kg.4__2662__AT2G44730.1 Arabidopsis lyrata fgenesh2_kg.4__2662__AT2G44730.1 N 0.000
gene05318-v1.0-hybrid Fragaria vesca gene05318-v1.0-hybrid N 0.000
GLYMA08G05630 Glycine max GLYMA08G05630 N 0.000
GLYMA18G48343 Glycine max GLYMA18G48343 N 0.000
Gorai.001G233700 Gossypium raimondii Gorai.001G233700 N 0.000
Gorai.004G167100 Gossypium raimondii Gorai.004G167100 N 0.000
Gorai.007G154900 Gossypium raimondii Gorai.007G154900 N 0.000
GRMZM2G379179 Zea mays GRMZM2G379179 N 0.000
GRMZM5G850092 Zea mays GRMZM5G850092 N 0.000
GSMUA_Achr6G04170_001 Musa acuminata GSMUA_Achr6G04170_001 N 0.000
LPERR08G15410 Leersia perrieri LPERR08G15410 N 0.000
MDP0000155725 Malus domestica MDP0000155725 N 0.000
MDP0000158598 Malus domestica MDP0000158598 N 0.000
MLOC_51079 Hordeum vulgare MLOC_51079 N 0.000
MTR_4g117990 Medicago truncatula MTR_4g117990 N 0.000
orange1.1g018620m.g Citrus sinensis orange1.1g018620m.g N 0.000
Pavir.J15698 Panicum virgatum Pavir.J15698 N 0.000
PK17306.1 Cannabis sativa PK17306.1 N 0.000
Pm029723 Prunus mume Pm029723 N 0.000
POPTR_0002s14030 Populus trichocarpa POPTR_0002s14030 N 0.000
POPTR_0014s05010 Populus trichocarpa POPTR_0014s05010 N 0.000
PRUPE_ppa010055mg Prunus persica PRUPE_ppa010055mg N 0.000
PRUPE_ppa021742mg Prunus persica PRUPE_ppa021742mg N 0.000
SapurV1A.0033s0070 Salix purpurea SapurV1A.0033s0070 N 0.000
Sb07g029070 Sorghum bicolor Sb07g029070 N 0.000
Si014062m.g Setaria italica Si014062m.g N 0.000
TCM_002925 Theobroma cacao TCM_002925 N 0.000
TCM_005773 Theobroma cacao TCM_005773 N 0.000
Thhalv10001488m.g Eutrema salsugineum Thhalv10001488m.g N 0.000
Traes_5BL_81FD6E89B Triticum aestivum Traes_5BL_81FD6E89B N 0.000
VIT_07s0005g06670 Vitis vinifera VIT_07s0005g06670 N 0.000