LACBIDRAFT_302761 (Laccaria bicolor)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 LACBIDRAFT_302761 T372091_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SCHCODRAFT_67234
M01419_2.00
Schizophyllum commune
BATCGGAV

BTCCGATV
PBM
Lambert et al.(2019)
pTH9776
0.683 0.971
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDR05637 Zinc cluster 31 67

Links

Other Zinc cluster family TFs
Other Laccaria bicolor TFs

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_009_00307 Aquilegia coerulea Aquca_009_00307 N
AT2G44020 Arabidopsis thaliana AT2G44020 N
Bo4g021230 Brassica oleracea Bo4g021230 N
Bostr.25993s0368 Boechera stricta Bostr.25993s0368 N
Cagra.1517s0032 Capsella grandiflora Cagra.1517s0032 N
Carubv10023033m.g Capsella rubella Carubv10023033m.g N
cassava22183.valid.m1 Manihot esculenta cassava22183.valid.m1 N
Ca_10412 Cicer arietinum Ca_10412 N
Ciclev10000930m.g Citrus clementina Ciclev10000930m.g N
Cla017427 Citrullus lanatus Cla017427 N
Eucgr.F02687 Eucalyptus grandis Eucgr.F02687 N
evm.TU.supercontig_151.12 Carica papaya evm.TU.supercontig_151.12 N
Gorai.003G090600 Gossypium raimondii Gorai.003G090600 N
mgf008193m Mimulus guttatus mgf008193m N
MTR_1g115415 Medicago truncatula MTR_1g115415 N
OBART02G35020 Oryza barthii OBART02G35020 N
orange1.1g048759m.g Citrus sinensis orange1.1g048759m.g N
PK11431.1 Cannabis sativa PK11431.1 N
Pm022294 Prunus mume Pm022294 N
POPTR_0013s12100 Populus trichocarpa POPTR_0013s12100 N
PRUPE_ppa005819mg Prunus persica PRUPE_ppa005819mg N
SapurV1A.0179s0360 Salix purpurea SapurV1A.0179s0360 N
SapurV1A.0287s0020 Salix purpurea SapurV1A.0287s0020 N
SapurV1A.0596s0020 Salix purpurea SapurV1A.0596s0020 N
scaffold_403309.1 Arabidopsis lyrata scaffold_403309.1 N
TCM_001393 Theobroma cacao TCM_001393 N
Thhalv10001406m.g Eutrema salsugineum Thhalv10001406m.g N
VIT_11s0016g02240 Vitis vinifera VIT_11s0016g02240 N