CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PAAG_03678
(
Paracoccidioides sp lutzii
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PAAG_03678
T376610_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU08658
M02628_2.00
Neurospora crassa
NYCGGBWAN
NTWVCCGRN
PBM
Weirauch et al.(2014)
pTH7896
0.546
0.595
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEH41757
Zinc cluster
45
81
TGCLTCRKRRIKCGEEKPTCNNCKKSKRECEGYAQRV
Links
Other
Zinc cluster
family TFs
Other
Paracoccidioides sp lutzii
TFs
159 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29727.m000472
Ricinus communis
29727.m000472
I
0.000
AMTR_s00007p00020440
Amborella trichopoda
AMTR_s00007p00020440
I
0.000
ASIL1
Arabidopsis thaliana
AT1G54060
D
0.000
Bo3g184450
Brassica oleracea
Bo3g184450
I
0.000
Bo6g033010
Brassica oleracea
Bo6g033010
I
0.000
Bo6g050870
Brassica oleracea
Bo6g050870
I
0.000
Bostr.28625s0284
Boechera stricta
Bostr.28625s0284
I
0.000
Bostr.7128s0077
Boechera stricta
Bostr.7128s0077
I
0.000
Bra037960
Brassica rapa
Bra037960
I
0.000
Cagra.0769s0020
Capsella grandiflora
Cagra.0769s0020
I
0.000
Cagra.3631s0002
Capsella grandiflora
Cagra.3631s0002
I
0.000
Carubv10009310m.g
Capsella rubella
Carubv10009310m.g
I
0.000
Carubv10015798m.g
Capsella rubella
Carubv10015798m.g
I
0.000
cassava116.valid.m1
Manihot esculenta
cassava116.valid.m1
I
0.000
cassava34877.m1
Manihot esculenta
cassava34877.m1
I
0.000
cassava47424.m1
Manihot esculenta
cassava47424.m1
I
0.000
Ciclev10026005m.g
Citrus clementina
Ciclev10026005m.g
I
0.000
Cla015773
Citrullus lanatus
Cla015773
I
0.000
Cucsa.359990
Cucumis sativus
Cucsa.359990
I
0.000
fgenesh1_pg.C_scaffold_3001317
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_3001317
I
0.000
ASIL1
Arabidopsis lyrata
fgenesh2_kg.1__4489__AT1G54060.1
I
0.000
GLYMA07G04790
Glycine max
GLYMA07G04790
I
0.000
GLYMA16G01370
Glycine max
GLYMA16G01370
I
0.000
Gorai.009G144800
Gossypium raimondii
Gorai.009G144800
I
0.000
GSMUA_Achr8G23650_001
Musa acuminata
GSMUA_Achr8G23650_001
I
0.000
LjSGA_010694.1
Lotus japonicus
LjSGA_010694.1
I
0.000
MDP0000255104
Malus domestica
MDP0000255104
I
0.000
MDP0000281471
Malus domestica
MDP0000281471
I
0.000
MTR_8g022290
Medicago truncatula
MTR_8g022290
I
0.000
orange1.1g019413m.g
Citrus sinensis
orange1.1g019413m.g
I
0.000
Pm013209
Prunus mume
Pm013209
I
0.000
POPTR_0001s06330
Populus trichocarpa
POPTR_0001s06330
N
0.000
POPTR_0003s19840
Populus trichocarpa
POPTR_0003s19840
I
0.000
PRUPE_ppa023115mg
Prunus persica
PRUPE_ppa023115mg
I
0.000
SapurV1A.0009s0880
Salix purpurea
SapurV1A.0009s0880
I
0.000
SapurV1A.0504s0110
Salix purpurea
SapurV1A.0504s0110
N
0.000
SapurV1A.2810s0010
Salix purpurea
SapurV1A.2810s0010
N
0.000
TCM_029209
Theobroma cacao
TCM_029209
I
0.000
Thhalv10011582m.g
Eutrema salsugineum
Thhalv10011582m.g
I
0.000
VIT_09s0002g00720
Vitis vinifera
VIT_09s0002g00720
N
0.000