VHEMI03626 (Torrubiella hemipterigena)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 VHEMI03626 T387708_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
clr-1
M02626_2.00 		Neurospora crassa
NNNHTCCGGAWNN
NNWTCCGGADNNN		 PBM
Weirauch et al.(2014)
pTH8805 		0.638 0.868
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CEJ84950 Zinc cluster 37 74

Links

Other Zinc cluster family TFs
Other Torrubiella hemipterigena TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28650.m000190 Ricinus communis 28650.m000190 N 0.000
cassava19449.valid.m1 Manihot esculenta cassava19449.valid.m1 N 0.000
Ciclev10027848m.g Citrus clementina Ciclev10027848m.g N 0.000
evm.TU.supercontig_81.123 Carica papaya evm.TU.supercontig_81.123 N 0.000
GLYMA13G41240 Glycine max GLYMA13G41240 N 0.000
Gorai.001G111600 Gossypium raimondii Gorai.001G111600 N 0.000
Gorai.003G130500 Gossypium raimondii Gorai.003G130500 N 0.000
MDP0000247940 Malus domestica MDP0000247940 N 0.000
orange1.1g046158m.g Citrus sinensis orange1.1g046158m.g N 0.000
PK08671.1 Cannabis sativa PK08671.1 N 0.000
Pm000718 Prunus mume Pm000718 N 0.000
Pm027957 Prunus mume Pm027957 N 0.000
POPTR_0001s24860 Populus trichocarpa POPTR_0001s24860 N 0.000
POPTR_0009s03790 Populus trichocarpa POPTR_0009s03790 N 0.000
POPTR_0009s03800 Populus trichocarpa POPTR_0009s03800 N 0.000
SapurV1A.0040s0480 Salix purpurea SapurV1A.0040s0480 N 0.000
SapurV1A.0041s0160 Salix purpurea SapurV1A.0041s0160 N 0.000
SapurV1A.0041s0170 Salix purpurea SapurV1A.0041s0170 N 0.000
SapurV1A.4599s0010 Salix purpurea SapurV1A.4599s0010 N 0.000
TCM_041814 Theobroma cacao TCM_041814 N 0.000