Bo1g141310 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo1g141310 T000733_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2A
M06655_2.00 		Arabidopsis thaliana
NNNNHDHMACCGMCWYHNNNN
NNNNDRWGKCGGTKDHDNNNN		 Dap-seq
OMalley et al.(2016)
DREB2_col_a 		0.756 0.900
DREB2A
M06656_2.00 		Arabidopsis thaliana
NHNHMACCGMCWTWD
HWAWGKCGGTKDNDN		 Dap-seq
OMalley et al.(2016)
DREB2_colamp_a 		0.756 0.900
Q1ESI9_MAIZE
M09714_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB2A_02 		0.689 0.840
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.677 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g141310.1 AP2 517 568

Links

Other AP2 family TFs
Other Brassica oleracea TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DREB2A Arabidopsis thaliana AT5G05410 D 0.756
PK07402.1 Cannabis sativa PK07402.1 D 0.677
Q1ESI9_MAIZE Zea mays Q1ESI9_MAIZE D 0.689
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.697
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.690
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.697
29729.m002292 Ricinus communis 29729.m002292 I 0.677
Bostr.13129s0423 Boechera stricta Bostr.13129s0423 I 0.753
Bostr.19424s1037 Boechera stricta Bostr.19424s1037 I 0.748
Cagra.1504s0045 Capsella grandiflora Cagra.1504s0045 I 0.762
Cagra.1655s0066 Capsella grandiflora Cagra.1655s0066 I 0.742
Carubv10001099m.g Capsella rubella Carubv10001099m.g I 0.762
Carubv10013771m.g Capsella rubella Carubv10013771m.g I 0.742
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.695
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I 0.691
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I 0.691
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.689
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.689
Thhalv10021161m.g Eutrema salsugineum Thhalv10021161m.g I 0.766
chr1.LjT01D01.90.nd Lotus japonicus chr1.LjT01D01.90.nd I 0.700
DREB2B Arabidopsis thaliana AT3G11020 I 0.684
F775_32062 Aegilops tauschii F775_32062 I 0.697
Bo2g006960 Brassica oleracea Bo2g006960 I 0.735
Bo3g063910 Brassica oleracea Bo3g063910 I 0.789
Bo5g136930 Brassica oleracea Bo5g136930 I 0.784
Bo9g177130 Brassica oleracea Bo9g177130 I 0.678
Bra001386 Brassica rapa Bra001386 I 0.790
Bra005852 Brassica rapa Bra005852 I 0.730
Bra028759 Brassica rapa Bra028759 I 0.735
Bra029889 Brassica rapa Bra029889 I 0.784
Bra034159 Brassica rapa Bra034159 I 0.805
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.697
DREB2B Arabidopsis lyrata fgenesh2_kg.3__1148__AT3G11020.1 I 0.724
DREB2A Arabidopsis lyrata fgenesh2_kg.6__469__AT5G05410.1 I 0.762
GLYMA07G19221 Glycine max GLYMA07G19221 I 0.694
GLYMA18G43750 Glycine max GLYMA18G43750 I 0.684
GRMZM2G006745 Zea mays GRMZM2G006745 I 0.689
PGSC0003DMG401023951 Solanum tuberosum PGSC0003DMG401023951 I 0.687
Sb09g016150 Sorghum bicolor Sb09g016150 I 0.691
Solyc06g050520.1 Solanum lycopersicum Solyc06g050520.1 I 0.680