29820.m001008 (Ricinus communis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 29820.m001008 T006722_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2A
M06655_2.00 		Arabidopsis thaliana
NNNNHDHMACCGMCWYHNNNN
NNNNDRWGKCGGTKDHDNNNN		 Dap-seq
OMalley et al.(2016)
DREB2_col_a 		0.685 0.712
DREB2A
M06656_2.00 		Arabidopsis thaliana
NHNHMACCGMCWTWD
HWAWGKCGGTKDNDN		 Dap-seq
OMalley et al.(2016)
DREB2_colamp_a 		0.685 0.712
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29820.m001008 AP2 73 135

Links

Other AP2 family TFs
Other Ricinus communis TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DREB2A Arabidopsis thaliana AT5G05410 D 0.685
cassava46663.m1 Manihot esculenta cassava46663.m1 I 0.702
chr1.LjT01D01.90.nd Lotus japonicus chr1.LjT01D01.90.nd I 0.742
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.680
Carubv10023556m.g Capsella rubella Carubv10023556m.g I 0.699
Carubv10013771m.g Capsella rubella Carubv10013771m.g I 0.685
Carubv10001099m.g Capsella rubella Carubv10001099m.g I 0.685
Cagra.7053s0020 Capsella grandiflora Cagra.7053s0020 I 0.699
Cagra.1655s0066 Capsella grandiflora Cagra.1655s0066 I 0.685
Cagra.1504s0045 Capsella grandiflora Cagra.1504s0045 I 0.685
Bostr.19424s1037 Boechera stricta Bostr.19424s1037 I 0.683
Bostr.13129s0423 Boechera stricta Bostr.13129s0423 I 0.689
TCM_021596 Theobroma cacao TCM_021596 I 0.684
Solyc06g050520.1 Solanum lycopersicum Solyc06g050520.1 I 0.728
PGSC0003DMG401023951 Solanum tuberosum PGSC0003DMG401023951 I 0.726
GLYMA18G43750 Glycine max GLYMA18G43750 I 0.755
GLYMA07G19221 Glycine max GLYMA07G19221 I 0.752
DREB2A Arabidopsis lyrata fgenesh2_kg.6__469__AT5G05410.1 I 0.685
Bra028759 Brassica rapa Bra028759 I 0.689
Bra005852 Brassica rapa Bra005852 I 0.687
Bo2g006960 Brassica oleracea Bo2g006960 I 0.689