CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10021891m.g
(
Citrus clementina
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Ciclev10021891m.g
T008020_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10021890m
AP2
120
168
CLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAARLYDRAAFMCGRE
Ciclev10021891m
AP2
120
168
CLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAARLYDRAAFMCGRE
Ciclev10021894m
AP2
120
168
CLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAARLYDRAAFMCGRE
Ciclev10021898m
AP2
120
168
CLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAARLYDRAAFMCGRE
Links
Other
AP2
family TFs
Other
Citrus clementina
TFs
76 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.119440
Cucumis sativus
Cucsa.119440
I
0.000
MDP0000446783
Malus domestica
MDP0000446783
I
0.000
MDP0000290585
Malus domestica
MDP0000290585
I
0.000
MDP0000165880
Malus domestica
MDP0000165880
I
0.000
MDP0000147009
Malus domestica
MDP0000147009
I
0.000
gene21047-v1.0-hybrid
Fragaria vesca
gene21047-v1.0-hybrid
I
0.000
gene01985-v1.0-hybrid
Fragaria vesca
gene01985-v1.0-hybrid
I
0.000
Bostr.23794s0027
Boechera stricta
Bostr.23794s0027
I
0.000
Aquca_030_00214
Aquilegia coerulea
Aquca_030_00214
I
0.000
Aquca_013_00679
Aquilegia coerulea
Aquca_013_00679
I
0.000
mgf007881m
Mimulus guttatus
mgf007881m
I
0.000
Pm018989
Prunus mume
Pm018989
I
0.000
Pm015262
Prunus mume
Pm015262
I
0.000
Cla001755
Citrullus lanatus
Cla001755
I
0.000
TCM_043306
Theobroma cacao
TCM_043306
I
0.000
TCM_043302
Theobroma cacao
TCM_043302
I
0.000
TCM_043275
Theobroma cacao
TCM_043275
I
0.000
TCM_026121
Theobroma cacao
TCM_026121
I
0.000
PRUPE_ppa022733mg
Prunus persica
PRUPE_ppa022733mg
I
0.000
PRUPE_ppa007606mg
Prunus persica
PRUPE_ppa007606mg
I
0.000
MTR_2g089170
Medicago truncatula
MTR_2g089170
N
0.000
TRIUR3_03342
Triticum urartu
TRIUR3_03342
N
0.000