ENSCING00000013307 (Ciona intestinalis)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 ENSCING00000013307 T014470_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arid5a
M00116_2.00 		Mus musculus
NHAATATTDNN
NNHAATATTDN		 PBM
Badis et al.(2009)
Arid5a_3770 		0.524 0.535
Arid5a
M01663_2.00 		Rattus norvegicus
NNNRWATHNN
NNDATWYNNN		 PBM
Weirauch et al.(2014)
pTH5121 		0.524 0.535
Arid5b
M01661_2.00 		Mus musculus
NDATWHNN
NNDWATHN		 PBM
Weirauch et al.(2014)
pTH4426 		0.494 0.581
ARID5B
M08707_2.00 		Homo sapiens
DNBKDRTATTSKD
HMSAATAYHMVNH		 Misc
Kulakovskiy et al.(2013)
ARI5B_HUMAN.H11MO.0.C 		0.494 0.581
Arid5b
M08708_2.00 		Mus musculus
DNBKDRTATTSKD
HMSAATAYHMVNH		 Misc
Kulakovskiy et al.(2013)
ARI5B_MOUSE.H11MO.0.C 		0.494 0.581
ARID5B
M09767_2.00 		Homo sapiens
KBDGTATTGTRSWB
VWSYACAATACHVM		 Transfac
Matys et al.(2006)
V$MRF2_01 		0.494 0.581
arid6
M01657_2.00 		Danio rerio
NNRWATYN
NRATWYNN		 PBM
Weirauch et al.(2014)
pTH5120 		0.484 0.581
e_gw.4.260.1_CONSTRUCT
M01668_2.00 		PBM CONSTRUCTS
NNNDATHNNN
NNNDATHNNN		 PBM
Weirauch et al.(2014)
pTH5122 		0.476 0.547
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCINP00000024499 ARID/BRIGHT 34 120

Links

Other ARID/BRIGHT family TFs
Other Ciona intestinalis TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GFI1 Homo sapiens ENSG00000162676 D
GFI1B Homo sapiens ENSG00000165702 D
Gfi1b Mus musculus ENSMUSG00000026815 D
Gfi1 Mus musculus ENSMUSG00000029275 D
Gfi1 Rattus norvegicus ENSRNOG00000002042 D
sens Drosophila melanogaster FBgn0002573 D
sens-2 Drosophila melanogaster FBgn0051632 D
WUBG_13248 Wuchereria bancrofti WUBG_13248 I
AAEL000869 Aedes aegypti AAEL000869 I
AGAP010926 Anopheles gambiae AGAP010926 I
BGIBMGA003190 Bombyx mori BGIBMGA003190 I
Bm9493 Brugia malayi Bm9493 I
CapteG45287 Capitella teleta CapteG45287 I
CGI_10001094 Crassostrea gigas CGI_10001094 I
CGI_10011355 Crassostrea gigas CGI_10011355 I
CGI_10017941 Crassostrea gigas CGI_10017941 I
GFI1 Anolis carolinensis ENSACAG00000004498 I
ENSAMEG00000013858 Ailuropoda melanoleuca ENSAMEG00000013858 I
ENSAMXG00000004835 Astyanax mexicanus ENSAMXG00000004835 I
ENSAMXG00000016347 Astyanax mexicanus ENSAMXG00000016347 I
ENSAPLG00000003373 Anas platyrhynchos ENSAPLG00000003373 I
ENSAPLG00000015700 Anas platyrhynchos ENSAPLG00000015700 I
GFI1B Bos taurus ENSBTAG00000012772 I
GFI1 Bos taurus ENSBTAG00000016723 I
GFI1B Canis familiaris ENSCAFG00000019877 I
GFI1 Canis familiaris ENSCAFG00000020155 I
GFI1 Callithrix jacchus ENSCJAG00000017609 I
GFI1B Callithrix jacchus ENSCJAG00000018071 I
GFI1 Cavia porcellus ENSCPOG00000011727 I
GFI1B Cavia porcellus ENSCPOG00000026928 I
ENSCSAG00000015008 Chlorocebus sabaeus ENSCSAG00000015008 I
gfi1aa Danio rerio ENSDARG00000020746 I
gfi1ab Danio rerio ENSDARG00000044457 I
gfi1b Danio rerio ENSDARG00000079947 I
GFI1 Dasypus novemcinctus ENSDNOG00000000782 I
GFI1B Dasypus novemcinctus ENSDNOG00000036528 I
Gfi1b Dipodomys ordii ENSDORG00000000342 I
GFI1 Equus caballus ENSECAG00000006647 I
GFI1B Equus caballus ENSECAG00000008127 I
GFI1 Erinaceus europaeus ENSEEUG00000000198 I
ENSFALG00000001479 Ficedula albicollis ENSFALG00000001479 I
GFI1 Felis catus ENSFCAG00000005914 I
GFI1B Felis catus ENSFCAG00000027147 I
gfi1ab Gasterosteus aculeatus ENSGACG00000004257 I
gfi1aa Gasterosteus aculeatus ENSGACG00000015674 I
gfi1b Gasterosteus aculeatus ENSGACG00000018134 I
GFI1B Gallus gallus ENSGALG00000003478 I
ENSGALG00000005940 Gallus gallus ENSGALG00000005940 I
GFI1 Gorilla gorilla ENSGGOG00000005320 I
GFI1B Gorilla gorilla ENSGGOG00000015828 I
ENSGMOG00000007737 Gadus morhua ENSGMOG00000007737 I
ENSGMOG00000017295 Gadus morhua ENSGMOG00000017295 I
ENSGMOG00000019123 Gadus morhua ENSGMOG00000019123 I
ENSLACG00000012207 Latimeria chalumnae ENSLACG00000012207 I
ENSLACG00000013362 Latimeria chalumnae ENSLACG00000013362 I
GFI1 Loxodonta africana ENSLAFG00000018346 I
GFI1B Loxodonta africana ENSLAFG00000022367 I
ENSLOCG00000004711 Lepisosteus oculatus ENSLOCG00000004711 I
ENSLOCG00000005750 Lepisosteus oculatus ENSLOCG00000005750 I
GFI1B Meleagris gallopavo ENSMGAG00000006129 I
GFI1 Meleagris gallopavo ENSMGAG00000008187 I
GFI1B Myotis lucifugus ENSMLUG00000006673 I
GFI1 Myotis lucifugus ENSMLUG00000015191 I
ENSMMUG00000005068 Macaca mulatta ENSMMUG00000005068 I
GFI1B Macaca mulatta ENSMMUG00000005948 I
GFI1 Monodelphis domestica ENSMODG00000011802 I
GFI1B Monodelphis domestica ENSMODG00000012600 I
ENSMPUG00000004178 Mustela putorius furo ENSMPUG00000004178 I
ENSMPUG00000012489 Mustela putorius furo ENSMPUG00000012489 I
ENSNLEG00000010470 Nomascus leucogenys ENSNLEG00000010470 I
ENSNLEG00000012963 Nomascus leucogenys ENSNLEG00000012963 I
GFI1B Ornithorhynchus anatinus ENSOANG00000014723 I
GFI1B Oryctolagus cuniculus ENSOCUG00000001793 I
GFI1B Otolemur garnettii ENSOGAG00000008879 I
GFI1 Otolemur garnettii ENSOGAG00000027913 I
ENSONIG00000010573 Oreochromis niloticus ENSONIG00000010573 I
ENSONIG00000013011 Oreochromis niloticus ENSONIG00000013011 I
ENSONIG00000019246 Oreochromis niloticus ENSONIG00000019246 I
GFI1B Ochotona princeps ENSOPRG00000000125 I
GFI1 Ochotona princeps ENSOPRG00000001473 I
gfi1aa Oryzias latipes ENSORLG00000005060 I
gfi1b Oryzias latipes ENSORLG00000014390 I
ENSPANG00000016433 Papio anubis ENSPANG00000016433 I
ENSPANG00000024216 Papio anubis ENSPANG00000024216 I
GFI1 Procavia capensis ENSPCAG00000011020 I
GFI1B Procavia capensis ENSPCAG00000012329 I
ENSPFOG00000003460 Poecilia formosa ENSPFOG00000003460 I
ENSPFOG00000017327 Poecilia formosa ENSPFOG00000017327 I
ENSPFOG00000023214 Poecilia formosa ENSPFOG00000023214 I
ENSPPYG00000019718 Pongo abelii ENSPPYG00000019718 I
ENSPSIG00000008734 Pelodiscus sinensis ENSPSIG00000008734 I
ENSPSIG00000012112 Pelodiscus sinensis ENSPSIG00000012112 I
ENSPTRG00000000961 Pan troglodytes ENSPTRG00000000961 I
GFI1B Pan troglodytes ENSPTRG00000021505 I
GFI1 Pteropus vampyrus ENSPVAG00000006928 I
Gfi1b Rattus norvegicus ENSRNOG00000011353 I
GFI1B Sus scrofa ENSSSCG00000005737 I
GFI1 Sus scrofa ENSSSCG00000006902 I
ENSSTOG00000014583 Ictidomys tridecemlineatus ENSSTOG00000014583 I
ENSSTOG00000022285 Ictidomys tridecemlineatus ENSSTOG00000022285 I
GFI1 Taeniopygia guttata ENSTGUG00000006060 I
gfi1ab Tetraodon nigroviridis ENSTNIG00000000651 I
gfi1b Tetraodon nigroviridis ENSTNIG00000003834 I
gfi1ab Takifugu rubripes ENSTRUG00000000415 I
gfi1b Takifugu rubripes ENSTRUG00000004525 I
gfi1aa Takifugu rubripes ENSTRUG00000004744 I
GFI1 Tursiops truncatus ENSTTRG00000000082 I
ENSXMAG00000009274 Xiphophorus maculatus ENSXMAG00000009274 I
GA16348 Drosophila pseudoobscura FBgn0076363 I
GA16696 Drosophila pseudoobscura FBgn0076711 I
GF10411 Drosophila ananassae FBgn0087452 I
GF15430 Drosophila ananassae FBgn0092455 I
GG10437 Drosophila erecta FBgn0102746 I
GG13774 Drosophila erecta FBgn0106037 I
GH13715 Drosophila grimshawi FBgn0121191 I
GH16734 Drosophila grimshawi FBgn0124205 I
GI13460 Drosophila mojavensis FBgn0136216 I
GI23984 Drosophila mojavensis FBgn0146708 I
GL15695 Drosophila persimilis FBgn0153299 I
GL26188 Drosophila persimilis FBgn0163770 I
GM16223 Drosophila sechellia FBgn0171139 I
GM24598 Drosophila sechellia FBgn0179461 I
GD12667 Drosophila simulans FBgn0184394 I
GJ11823 Drosophila virilis FBgn0199077 I
GJ21268 Drosophila virilis FBgn0208401 I
GK12454 Drosophila willistoni FBgn0214464 I
GK24242 Drosophila willistoni FBgn0226203 I
GE14143 Drosophila yakuba FBgn0231766 I
GE20069 Drosophila yakuba FBgn0237393 I
GA28112 Drosophila pseudoobscura FBgn0249475 I
GB48486 Apis mellifera GB48486 I
HelroG145534 Helobdella robusta HelroG145534 I
HelroG145685 Helobdella robusta HelroG145685 I
HelroG67579 Helobdella robusta HelroG67579 I
HMEL012459 Heliconius melpomene HMEL012459 I
KGM_22443 Danaus plexippus KGM_22443 I
L798_01833 Zootermopsis nevadensis L798_01833 I
LotgiG129344 Lottia gigantea LotgiG129344 I
LotgiG83709 Lottia gigantea LotgiG83709 I
LotgiG98465 Lottia gigantea LotgiG98465 I
MESCA000812 Megaselia scalaris MESCA000812 I
NEMVEDRAFT_v1g182742 Nematostella vectensis NEMVEDRAFT_v1g182742 I
NV16026 Nasonia vitripennis NV16026 I
PHUM248190 Pediculus humanus PHUM248190 I
SPU_012645 Strongylocentrotus purpuratus SPU_012645 I
TC013474 Tribolium castaneum TC013474 I
tetur16g01570 Tetranychus urticae tetur16g01570 I
Aan_R000889 Calypte anna Aan_R000889 I
Aan_R008865 Calypte anna Aan_R008865 I
Afo_R001655 Aptenodytes forsteri Afo_R001655 I
Afo_R006147 Aptenodytes forsteri Afo_R006147 I
Alligator_sinensis_CCG007476.1 Alligator sinensis Alligator_sinensis_CCG007476.1 I
Brh_R002465 Buceros rhinoceros Brh_R002465 I
Cflo_04170--XP_001120914.1_APIME Camponotus floridanus Cflo_04170--XP_001120914.1_APIME I
Cmyd_10004881 Chelonia mydas Cmyd_10004881 I
Cmyd_10017172 Chelonia mydas Cmyd_10017172 I
ENSBTAP00000016974-D1 Bos grunniens ENSBTAP00000016974-D1 I
ENSBTAP00000022231-D1 Bos grunniens ENSBTAP00000022231-D1 I
ENSP00000361195 Macaca fascicularis ENSP00000361195 I
ENSP00000399719 Macaca fascicularis ENSP00000399719 I
Gfo_R007994 Geospiza fortis Gfo_R007994 I
Gfo_R010648 Geospiza fortis Gfo_R010648 I
Myotis_brandtii_GFI1B_10010118 Myotis brandtii Myotis_brandtii_GFI1B_10010118 I
Ogr09401 Ophisaurus gracilis Ogr09401 I
Pvit_00259 Pogona vitticeps Pvit_00259 I
Tal_R001363 Tyto alba Tal_R001363 I
Tal_R006464 Tyto alba Tal_R006464 I
e_gw.11.853.1 Branchiostoma floridae e_gw.11.853.1 I
Sakowv30015313m.g Saccoglossus kowalevskii Sakowv30015313m.g I
LCUP007432 Lucilia cuprina LCUP007432 I
gfi1b Xenopus tropicalis XB-GENE-944426 I
gfi1b.L Xenopus laevis XB-GENE-944429 I
gfi1 Xenopus tropicalis XB-GENE-960553 I
AATE011452 Anopheles atroparvus AATE011452 I
ACOM022805 Anopheles coluzzii ACOM022805 I
ADIR005637 Anopheles dirus ADIR005637 I
AFAF000823 Anopheles farauti AFAF000823 I
AMEC011115 Anopheles melas AMEC011115 I
AMEM009379 Anopheles merus AMEM009379 I
ASTEI06414 Anopheles stephensi ASTEI06414 I
LLOJ009104 Lutzomyia longipalpis LLOJ009104 I
MDOA006012 Musca domestica MDOA006012 I
MDOA011065 Musca domestica MDOA011065 I
ACAC_0000515301 Angiostrongylus cantonensis ACAC_0000515301 I
BXY_1436800 Bursaphelenchus xylophilus BXY_1436800 I
DILT_0000061901 Diphyllobothrium latum DILT_0000061901 I
HCOI00212900 Haemonchus contortus HCOI00212900 I
MhA1_Contig1061.frz3.gene12 Meloidogyne hapla MhA1_Contig1061.frz3.gene12 I
nAv.1.0.1.g05276 Acanthocheilonema viteae nAv.1.0.1.g05276 I
PTRK_0000195600 Parastrongyloides trichosuri PTRK_0000195600 I
PXEA_0001261301 Protopolystoma xenopodis PXEA_0001261301 I
RSKR_0000656700 Rhabditophanes kr3021 RSKR_0000656700 I
SPAL_0000614400 Strongyloides papillosus SPAL_0000614400 I
SSLN_0000272801 Schistocephalus solidus SSLN_0000272801 I
SSTP_0000165900 Strongyloides stercoralis SSTP_0000165900 I
SVE_0901200 Strongyloides venezuelensis SVE_0901200 I