ARID5A (Pteropus vampyrus)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 ENSPVAG00000009400 T014749_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arid5a
M00116_2.00 		Mus musculus
NHAATATTDNN
NNHAATATTDN		 PBM
Badis et al.(2009)
Arid5a_3770 		0.785 0.988
Arid5a
M01663_2.00 		Rattus norvegicus
NNNRWATHNN
NNDATWYNNN		 PBM
Weirauch et al.(2014)
pTH5121 		0.785 0.988
arid6
M01657_2.00 		Danio rerio
NNRWATYN
NRATWYNN		 PBM
Weirauch et al.(2014)
pTH5120 		0.649 0.647
Arid5b
M01661_2.00 		Mus musculus
NDATWHNN
NNDWATHN		 PBM
Weirauch et al.(2014)
pTH4426 		0.632 0.753
ARID5B
M08707_2.00 		Homo sapiens
DNBKDRTATTSKD
HMSAATAYHMVNH		 Misc
Kulakovskiy et al.(2013)
ARI5B_HUMAN.H11MO.0.C 		0.632 0.753
Arid5b
M08708_2.00 		Mus musculus
DNBKDRTATTSKD
HMSAATAYHMVNH		 Misc
Kulakovskiy et al.(2013)
ARI5B_MOUSE.H11MO.0.C 		0.632 0.753
ARID5B
M09767_2.00 		Homo sapiens
KBDGTATTGTRSWB
VWSYACAATACHVM		 Transfac
Matys et al.(2006)
V$MRF2_01 		0.632 0.753
e_gw.4.260.1_CONSTRUCT
M01668_2.00 		PBM CONSTRUCTS
NNNDATHNNN
NNNDATHNNN		 PBM
Weirauch et al.(2014)
pTH5122 		0.493 0.600
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000008860 ARID/BRIGHT 78 163

Links

Other ARID/BRIGHT family TFs
Other Pteropus vampyrus TFs

152 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ssrp1a Danio rerio ENSDARG00000037397 I 0.000
Cflo_00230--XP_624018.2_APIME Camponotus floridanus Cflo_00230--XP_624018.2_APIME N 0.000
TCNE_0001783901 Toxocara canis TCNE_0001783901 N 0.000
SMUV_0000358401 Syphacia muris SMUV_0000358401 N 0.000
OFLC_0000770701 Onchocerca flexuosa OFLC_0000770701 N 0.000
nOo.2.0.1.g02324 Onchocerca ochengi nOo.2.0.1.g02324 N 0.000
nLs.2.1.2.g07238 Litomosoides sigmodontis nLs.2.1.2.g07238 N 0.000
nDi.2.2.2.g07477 Dirofilaria immitis nDi.2.2.2.g07477 N 0.000
nAv.1.0.1.g03971 Acanthocheilonema viteae nAv.1.0.1.g03971 N 0.000
GPUH_0001539601 Gongylonema pulchrum GPUH_0001539601 N 0.000
GPUH_0001272801 Gongylonema pulchrum GPUH_0001272801 N 0.000
EEL_0000829801 Elaeophora elaphi EEL_0000829801 N 0.000
ASU_13985 Ascaris suum ASU_13985 N 0.000
ASIM_0000114801 Anisakis simplex ASIM_0000114801 N 0.000
ALUE_0001798401 Ascaris lumbricoides ALUE_0001798401 N 0.000
BGLB002303 Biomphalaria glabrata BGLB002303 N 0.000
SMU15031660 Schmidtea mediterranea SMU15031660 N 0.000
CAOG_07557 Capsaspora owczarzaki CAOG_07557 N 0.000
EDI_340970 Entamoeba dispar EDI_340970 N 0.000
WBGene00244511 Onchocerca volvulus WBGene00244511 N 0.000
Thaps2728 Thalassiosira pseudonana Thaps2728 N 0.000
NEMVEDRAFT_v1g59568 Nematostella vectensis NEMVEDRAFT_v1g59568 N 0.000
LotgiG207546 Lottia gigantea LotgiG207546 N 0.000
LOAG_04347 Loa loa LOAG_04347 N 0.000
Hmgb1 Rattus norvegicus ENSRNOG00000029813 N 0.000
ENSAPLG00000003986 Anas platyrhynchos ENSAPLG00000003986 N 0.000
ENSAMXG00000014826 Astyanax mexicanus ENSAMXG00000014826 N 0.000
CGI_10024258 Crassostrea gigas CGI_10024258 N 0.000
Bm2524 Brugia malayi Bm2524 N 0.000
WUBG_03677 Wuchereria bancrofti WUBG_03677 N 0.000
SPPG_03502 Spizellomyces punctatus SPPG_03502 N 0.000